CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG88937
KRG89998
KRG94783
KRG96119
KRG99521
KRG99949
KRH02502
KRH03090
KRH03376
KRH04346
KRH04348
KRH06738
KRH08479
KRH10122
KRH12664
KRH16989
KRH17709
KRH19450
KRH20021
KRH22229
KRH23214
KRH24316
KRH24617
KRH25888
KRH27110
KRH28295
KRH28296
KRH29295
KRH29616
KRH32645
KRH37650
KRH41057
KRH42480
KRH49100
KRH54462
KRH54632
KRH55616
KRH56866
KRH57009
KRH58186
KRH58189
KRH59736
KRH63271
KRH63457
KRH66092
KRH67832
KRH70130
KRH72628
KRH75301
KRH77192
KRH77195

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32230.1	KRH10122	AT1G06040.1	11018516
AT1G32230.1	KRH23214	AT1G06040.1	11018516
AT1G32230.1	KRH24617	AT1G06040.1	11018516
AT1G32230.1	KRH29616	AT1G06040.1	11018516
AT1G32230.1	KRH10122	AT1G06040.1	19548978
AT1G32230.1	KRH23214	AT1G06040.1	19548978
AT1G32230.1	KRH24617	AT1G06040.1	19548978
AT1G32230.1	KRH29616	AT1G06040.1	19548978
AT1G32230.1	KRH03376	AT1G74890.1	19548978
AT1G32230.1	KRH54462	AT1G74890.1	19548978
AT1G32230.1	KRH57009	AT1G74890.1	19548978
AT1G32230.1	KRH63457	AT1G74890.1	19548978
AT1G32230.1	KRH42480	AT2G01980.1	17023541
AT1G32230.1	KRH24316	AT2G16770.1	19548978
AT1G32230.1	KRH29295	AT2G16770.1	19548978
AT1G32230.1	KRH04346	AT2G22760.1	19548978
AT1G32230.1	KRH04348	AT2G22760.1	19548978
AT1G32230.1	KRH28295	AT2G22760.1	19548978
AT1G32230.1	KRH28296	AT2G22760.1	19548978
AT1G32230.1	KRH58186	AT2G22760.1	19548978
AT1G32230.1	KRH58189	AT2G22760.1	19548978
AT1G32230.1	KRH77192	AT2G22760.1	19548978
AT1G32230.1	KRH77195	AT2G22760.1	19548978
AT1G32230.1	KRH41057	AT2G33550.1	19548978
AT1G32230.1	KRH59736	AT2G33550.1	19548978
AT1G32230.1	KRG99521	AT2G37630.1	19548978
AT1G32230.1	KRG99949	AT2G37630.1	19548978
AT1G32230.1	KRH49100	AT2G37630.1	19548978
AT1G32230.1	KRH66092	AT2G37630.1	19548978
AT1G32230.1	KRG94783	AT3G04060.1	19548978
AT1G32230.1	KRH06738	AT3G04060.1	19548978
AT1G32230.1	KRH08479	AT3G04060.1	19548978
AT1G32230.1	KRH70130	AT3G04060.1	19548978
AT1G32230.1	KRG94783	AT3G04060.1	25348421
AT1G32230.1	KRH06738	AT3G04060.1	25348421
AT1G32230.1	KRH08479	AT3G04060.1	25348421
AT1G32230.1	KRH70130	AT3G04060.1	25348421
AT1G32230.1	KRG88937	AT4G00050.1	19548978
AT1G32230.1	KRH75301	AT4G00050.1	19548978
AT1G32230.1	KRH02502	AT4G01720.1	19548978
AT1G32230.1	KRH12664	AT4G01720.1	19548978
AT1G32230.1	KRH19450	AT4G01720.1	19548978
AT1G32230.1	KRH37650	AT4G01720.1	19548978
AT1G32230.1	KRG96119	AT5G03760.1	19548978
AT1G32230.1	KRH20021	AT5G03760.1	19548978
AT1G32230.1	KRH32645	AT5G03760.1	19548978
AT1G32230.1	KRH67832	AT5G03760.1	19548978
AT1G32230.1	KRG89998	AT5G48250.1	19548978
AT1G32230.1	KRH16989	AT5G48250.1	19548978
AT1G32230.1	KRH17709	AT5G48250.1	19548978
AT1G32230.1	KRH72628	AT5G48250.1	19548978
AT1G32230.1	KRH22229	AT5G54680.1	19548978
AT1G32230.1	KRH25888	AT5G54680.1	19548978
AT1G32230.1	KRH27110	AT5G54680.1	19548978
AT1G32230.1	KRH55616	AT5G54680.1	19548978
AT1G32230.1	KRH03090	AT5G61270.1	19548978
AT1G32230.1	KRH54632	AT5G61270.1	19548978
AT1G32230.1	KRH56866	AT5G61270.1	19548978
AT1G32230.1	KRH63271	AT5G61270.1	19548978

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39574	Soybean	mitochondrion, nucleus, plastid	92.97	92.97
KRH74373	Soybean	mitochondrion	63.12	77.15
VIT_02s0012g01920.t01	Wine grape	cytosol	40.82	44.65
VIT_02s0012g01930.t01	Wine grape	nucleus	43.74	40.93
Solyc08g005270.2.1	Tomato	nucleus	40.99	39.83
Bra017317.1-P	Field mustard	nucleus	36.19	39.81
CDY32124	Canola	nucleus	35.85	39.43
CDY60257	Canola	cytosol	21.96	39.14
CDY22597	Canola	nucleus	36.02	38.6
AT1G32230.1	Thale cress	nucleus	38.94	38.54
Bra023252.1-P	Field mustard	nucleus	31.73	38.38
PGSC0003DMT400038368	Potato	nucleus	38.77	38.37
AT2G35510.3	Thale cress	cytosol	36.88	37.85
CDY67026	Canola	nucleus	35.68	37.82
Bra035511.1-P	Field mustard	cytosol	36.02	37.63
Bra005336.1-P	Field mustard	cytosol, nucleus, plastid	33.1	36.83
CDX84199	Canola	cytosol, nucleus, plastid	31.05	36.71
CDY43007	Canola	nucleus	35.68	35.8
CDY31694	Canola	nucleus	32.42	35.8
CDY41739	Canola	cytosol	32.76	34.73
GSMUA_Achr11P...	Banana	nucleus	29.5	33.08
PGSC0003DMT400043197	Potato	nucleus	33.62	33.0
GSMUA_Achr2P18060_001	Banana	nucleus	32.42	32.87
GSMUA_Achr8P14660_001	Banana	cytosol, endoplasmic reticulum, nucleus	30.87	32.73
KRH42972	Soybean	cytosol	15.61	32.04
GSMUA_Achr5P14120_001	Banana	nucleus	30.87	31.8
TraesCS1B01G210300.4	Wheat	peroxisome	31.39	31.07
Os10t0577800-01	Rice	nucleus	31.05	30.63
TraesCS1D01G199200.1	Wheat	cytosol, nucleus, plastid	31.05	30.57
HORVU1Hr1G050960.7	Barley	nucleus	31.73	30.38
TraesCS1A01G195400.4	Wheat	cytosol	30.7	30.24
GSMUA_Achr4P19000_001	Banana	nucleus	21.1	29.36
TraesCS4A01G321300.1	Wheat	nucleus	28.47	29.17
KXG38822	Sorghum	nucleus	29.5	28.91
TraesCS5D01G551800.3	Wheat	nucleus	28.64	28.89
TraesCS5B01G557500.2	Wheat	nucleus	28.3	28.55
HORVU5Hr1G124010.1	Barley	nucleus	28.3	28.5
Zm00001d014423_P002	Maize	nucleus	29.85	28.39
Zm00001d030110_P001	Maize	mitochondrion, nucleus	28.99	28.36
Os03t0854800-03	Rice	nucleus	28.13	28.08
KRH03292	Soybean	cytosol	15.95	27.68
EER90487	Sorghum	nucleus	26.07	26.53
KRH57070	Soybean	cytosol	14.75	26.3
KRH63531	Soybean	nucleus	14.75	26.06
HORVU0Hr1G014460.1	Barley	nucleus	23.5	23.74
Zm00001d012821_P003	Maize	extracellular, vacuole	25.9	23.02

Protein Annotations

EntrezGene:100800707	Gene3D:3.90.228.10	MapMan:35.1	ProteinID:ACJ61470.1	EMBL:ACUP02000021	EnsemblPlantsGene:GLYMA_01G015000
GO:GO:0003674	GO:GO:0003824	GO:GO:0003950	GO:GO:0016740	UniProt:I1J4R8	InterPro:IPR012317
EnsemblPlants:KRH74370	ProteinID:KRH74370	ProteinID:KRH74370.1	PFAM:PF12174	PFscan:PS51059	PANTHER:PTHR32263
PANTHER:PTHR32263:SF4	InterPro:Poly(ADP-ribose)pol_cat_dom	InterPro:RST	SUPFAM:SSF56399	UniParc:UPI00023375E4	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:1485325..1491704

Molecular Weight (calculated)

64937.5 Da

IEP (calculated)

7.363

GRAVY (calculated)

-0.381

Length

583 amino acids

Sequence
(BLAST)

001: MEAKIAKALD RVALNLKRKR ATRYAAHLSG ASQPMLGHWS SLTSQTSRAV KRMRLGGYRN RLTNAGPHIG RSLARRFLNY KKSGRLERLM FYENGEWLDF
101: PKDVVDLVKK DLEVKKAAVE IESNGYHLLF DFLHLHKVDL KTGLQQPIAL IDEAGCCFFP EIYAASDEKP YNLSKQECGR SPDSYASNEI KLHLEVEING
201: VDQSRLSECS GESNALVKGI QIDTKQNCCQ YDVEVEDSIN KKDCGNVGED IQQHQDIGLD AYTESVYGIL DLNSVQKMFL KGMSSFGSTD SDIVEIYQCS
301: GASMQARWEL FQKQAELTKK NHGEANIRYA WLASSKGELS TMMNYGLSHY GLSGSKCTYG IGVHLAAVTC PDASVRYCDV DENGVRHLAL CRVIMGNMEI
401: LQPGTGQFHP SSCEYDNGVD SIECPRYYVV WNMNMNTHIY PEFVVSFKVS SDAEGHFCGS EGKNVSGVNS ACQGPHGLLH SESSTVDNGK APSMVASTPK
501: VPKSPWMPFP LLLDAIRNQV PPKGMDVIKI YYEQFRSKHI SRDDFVKMLR LIVGDGLLRT TITNLQFKIP SGGELKGSIK KEV

Best Arabidopsis Sequence Match ( AT1G32230.1 )
(BLAST)

001: MEAKIVKVLD SSRCEDGFGK KRKRAASYAA YVTGVSCAKL QNVPPPNGQC QIPDKRRRLE GENKLSAYEN RSGKALVRYY TYFKKTGIAK RVMMYENGEW
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL

Arabidopsis Description

RCD1Poly [ADP-ribose] polymerase [Source:UniProtKB/TrEMBL;Acc:M5BF30]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.