Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G16770.1 | KRH39574 | AT1G32230.1 | 19548978 |
| AT2G16770.1 | KRH74370 | AT1G32230.1 | 19548978 |
| AT2G16770.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29295 | Soybean | nucleus | 84.5 | 84.81 |
| VIT_03s0038g02420.t01 | Wine grape | nucleus | 67.16 | 67.16 |
| CDY26786 | Canola | nucleus | 56.46 | 64.02 |
| CDY47478 | Canola | nucleus | 56.09 | 63.07 |
| CDX89748 | Canola | nucleus | 57.56 | 62.9 |
| Bra013048.1-P | Field mustard | nucleus | 55.35 | 62.76 |
| Bra037290.1-P | Field mustard | nucleus | 55.35 | 62.76 |
| AT2G16770.1 | Thale cress | nucleus | 57.56 | 62.65 |
| Solyc01g111580.2.1 | Tomato | nucleus | 62.36 | 62.59 |
| CDY02237 | Canola | nucleus | 54.98 | 62.34 |
| PGSC0003DMT400015830 | Potato | nucleus | 62.36 | 62.13 |
| AT4G35040.2 | Thale cress | nucleus | 57.56 | 59.77 |
| Bra034668.1-P | Field mustard | nucleus | 54.61 | 58.04 |
| CDY17503 | Canola | nucleus | 54.61 | 58.04 |
| Bra011580.1-P | Field mustard | nucleus | 49.45 | 58.01 |
| CDY52654 | Canola | nucleus | 49.82 | 56.72 |
| PGSC0003DMT400031184 | Potato | nucleus | 52.03 | 54.44 |
| CDX76308 | Canola | nucleus | 54.24 | 53.85 |
| CDX69107 | Canola | nucleus | 52.03 | 52.03 |
| TraesCS7A01G530400.1 | Wheat | nucleus | 35.42 | 51.06 |
| GSMUA_Achr3P00670_001 | Banana | nucleus | 51.66 | 50.91 |
| TraesCS7A01G531800.1 | Wheat | nucleus | 36.53 | 50.77 |
| TraesCS7D01G518200.1 | Wheat | nucleus | 32.84 | 50.0 |
| GSMUA_Achr1P14830_001 | Banana | nucleus | 50.55 | 49.82 |
| TraesCS7D01G519200.1 | Wheat | nucleus | 35.79 | 49.49 |
| TraesCS7B01G448000.1 | Wheat | nucleus | 31.73 | 48.86 |
| Solyc10g055550.1.1 | Tomato | plasma membrane | 53.14 | 47.37 |
| TraesCS7D01G413100.1 | Wheat | nucleus | 33.58 | 47.15 |
| Os06t0716800-01 | Rice | nucleus | 47.23 | 47.06 |
| TraesCS7B01G449200.1 | Wheat | nucleus | 35.42 | 47.06 |
| EER90398 | Sorghum | nucleus | 47.23 | 46.89 |
| HORVU6Hr1G002780.1 | Barley | nucleus | 20.66 | 46.28 |
| Zm00001d014795_P001 | Maize | nucleus | 46.86 | 46.01 |
| TraesCS5D01G025800.1 | Wheat | nucleus | 45.02 | 45.86 |
| HORVU7Hr1G117010.1 | Barley | nucleus | 32.47 | 45.83 |
| HORVU7Hr1G117170.1 | Barley | nucleus | 33.95 | 45.77 |
| HORVU5Hr1G005780.2 | Barley | nucleus | 44.65 | 44.98 |
| TraesCS5B01G017700.1 | Wheat | nucleus | 43.91 | 44.91 |
| HORVU5Hr1G116780.1 | Barley | nucleus | 34.32 | 43.46 |
| TraesCS7D01G518100.1 | Wheat | nucleus | 39.48 | 42.8 |
| TraesCS7B01G447900.1 | Wheat | nucleus | 40.22 | 42.75 |
| TraesCS7A01G530300.1 | Wheat | nucleus | 39.85 | 42.69 |
| TraesCS5A01G020700.1 | Wheat | nucleus | 44.28 | 40.96 |
| HORVU7Hr1G117020.4 | Barley | nucleus | 39.11 | 40.61 |
| GSMUA_Achr7P03840_001 | Banana | golgi, mitochondrion, nucleus, plastid | 48.71 | 39.76 |
| Zm00001d036400_P001 | Maize | nucleus | 26.2 | 39.23 |
| KRG89001 | Soybean | nucleus | 32.47 | 36.67 |
| TraesCS7B01G321300.1 | Wheat | nucleus | 38.01 | 31.79 |
| TraesCS7A01G420400.1 | Wheat | nucleus | 35.42 | 31.37 |
| HORVU1Hr1G072090.1 | Barley | plastid | 16.97 | 27.06 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.3 | EntrezGene:780549 | EMBL:ACUP02007174 | ncoils:Coil | EnsemblPlantsGene:GLYMA_12G033000 |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | UniProt:I1LPT1 | InterPro:IPR004827 | EnsemblPlants:KRH24316 | ProteinID:KRH24316 |
| ProteinID:KRH24316.1 | PFAM:PF07716 | PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI00023CBBA4 | InterPro:bZIP | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:2494638..2498329
Molecular Weight (calculated)
29549.6 Da
IEP (calculated)
6.826
GRAVY (calculated)
-0.682
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDGELDFSN HEVFSSPNMG ELPSSGSMDS FFDELLKDTH ACTHTHTCNP PGPDFSHTHT CYHVHTKIVP APEEDHVATD DTAESAEKKS SSSKKRSLGN
101: KEAVRKYREK KKARAASLED EVVKLRALNQ HLMKKLKGQA ALEAEIARLK CLLVDIRGRI EGEIGSFPYQ KPTPNANPPV ANLPGSYVMN PCNLQCDDRV
201: YCHHPYGKIG ESAALNGEEF DGCEFENLQC LASQNLGLKD LRACGVGQAR SNVNSSASNK RKGGSHAVTA G
101: KEAVRKYREK KKARAASLED EVVKLRALNQ HLMKKLKGQA ALEAEIARLK CLLVDIRGRI EGEIGSFPYQ KPTPNANPPV ANLPGSYVMN PCNLQCDDRV
201: YCHHPYGKIG ESAALNGEEF DGCEFENLQC LASQNLGLKD LRACGVGQAR SNVNSSASNK RKGGSHAVTA G
001: MEDGELDFSN QEVFSSSEMG ELPPSNCSMD SFFDGLLMDT NAACTHTHTC NPTGPENTHT HTCFHVHTKI LPDESDEKVS TDDTAESCGK KGEKRPLGNR
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
Arabidopsis Description
BZIP19Basic leucine zipper 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY76]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.