Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G014460.1 | |
| HORVU1Hr1G050960.7 | |
| HORVU5Hr1G124010.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G16770.1 | HORVU0Hr1G014460.1 | AT1G32230.1 | 19548978 |
| AT2G16770.1 | HORVU1Hr1G050960.7 | AT1G32230.1 | 19548978 |
| AT2G16770.1 | HORVU5Hr1G124010.1 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G449200.1 | Wheat | nucleus | 81.09 | 79.9 |
| HORVU7Hr1G117010.1 | Barley | nucleus | 70.65 | 73.96 |
| TraesCS7A01G531800.1 | Wheat | nucleus | 70.15 | 72.31 |
| TraesCS7D01G519200.1 | Wheat | nucleus | 68.16 | 69.9 |
| HORVU5Hr1G116780.1 | Barley | nucleus | 51.24 | 48.13 |
| HORVU6Hr1G002780.1 | Barley | nucleus | 28.86 | 47.93 |
| HORVU7Hr1G117020.4 | Barley | nucleus | 54.23 | 41.76 |
| Zm00001d014795_P001 | Maize | nucleus | 57.21 | 41.67 |
| Os06t0716800-01 | Rice | nucleus | 56.22 | 41.54 |
| EER90398 | Sorghum | nucleus | 55.22 | 40.66 |
| HORVU5Hr1G005780.2 | Barley | nucleus | 54.23 | 40.52 |
| HORVU1Hr1G067680.1 | Barley | nucleus | 43.28 | 38.67 |
| HORVU0Hr1G000950.1 | Barley | nucleus | 42.79 | 38.22 |
| Bra037290.1-P | Field mustard | nucleus | 45.27 | 38.08 |
| CDY26786 | Canola | nucleus | 44.78 | 37.66 |
| CDY02237 | Canola | nucleus | 44.78 | 37.66 |
| Bra013048.1-P | Field mustard | nucleus | 44.28 | 37.24 |
| CDY47478 | Canola | nucleus | 44.28 | 36.93 |
| CDX89748 | Canola | nucleus | 45.27 | 36.69 |
| Bra011580.1-P | Field mustard | nucleus | 41.79 | 36.36 |
| VIT_03s0038g02420.t01 | Wine grape | nucleus | 48.76 | 36.16 |
| AT2G16770.1 | Thale cress | nucleus | 44.78 | 36.14 |
| AT4G35040.2 | Thale cress | nucleus | 46.77 | 36.02 |
| CDY52654 | Canola | nucleus | 41.79 | 35.29 |
| KRH29295 | Soybean | nucleus | 47.26 | 35.19 |
| CDY17503 | Canola | nucleus | 44.28 | 34.9 |
| Bra034668.1-P | Field mustard | nucleus | 44.28 | 34.9 |
| GSMUA_Achr3P00670_001 | Banana | nucleus | 47.26 | 34.55 |
| HORVU3Hr1G078550.1 | Barley | nucleus | 36.32 | 34.27 |
| GSMUA_Achr1P14830_001 | Banana | nucleus | 46.77 | 34.18 |
| KRH24316 | Soybean | nucleus | 45.77 | 33.95 |
| Solyc01g111580.2.1 | Tomato | nucleus | 44.28 | 32.96 |
| PGSC0003DMT400015830 | Potato | nucleus | 44.28 | 32.72 |
| CDX76308 | Canola | nucleus | 44.28 | 32.6 |
| CDX69107 | Canola | nucleus | 42.29 | 31.37 |
| Zm00001d036400_P001 | Maize | nucleus | 26.87 | 29.83 |
| HORVU1Hr1G072090.1 | Barley | plastid | 24.88 | 29.41 |
| GSMUA_Achr7P03840_001 | Banana | golgi, mitochondrion, nucleus, plastid | 48.26 | 29.22 |
| PGSC0003DMT400031184 | Potato | nucleus | 37.31 | 28.96 |
| Solyc10g055550.1.1 | Tomato | plasma membrane | 38.31 | 25.33 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.3 | UniProt:A0A287XY32 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU7Hr1G117170 | EnsemblPlants:HORVU7Hr1G117170.1 | InterPro:IPR004827 | PFAM:PF07716 | PANTHER:PTHR23334 |
| PANTHER:PTHR23334:SF25 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000B47EDB6 | InterPro:bZIP | SEG:seg |
Description
No Description!
Coordinates
chrchr7H:-:644835905..644836986
Molecular Weight (calculated)
21915.7 Da
IEP (calculated)
7.653
GRAVY (calculated)
-0.635
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDGDLDFSS MGSYFDLDVL GDTAEHLARC THTHTCNPPA HHHHPHTHTC LHVHSKFPAP ASPDAGAETP AEFEDAHATS RTKRRRPSGN RAAVRKYREK
101: KKEHTAVLQE EAAHLRALND QLVRKVQDHA ALEAEAARLR CLLVDVRGRI EGEIGAFPYQ RRQAKGDGPG SAAAGAGAAG PVMMSSCGFV RTCEQPPVCF
201: R
101: KKEHTAVLQE EAAHLRALND QLVRKVQDHA ALEAEAARLR CLLVDVRGRI EGEIGAFPYQ RRQAKGDGPG SAAAGAGAAG PVMMSSCGFV RTCEQPPVCF
201: R
001: MDDGELEFSN SNMGGELPSC SMDSFFDELL RDSHACTHTH TCNPPGPENT HTHTCLHVHT KILPDKVSTD DTSESSGKKR PLGNREAVRK YREKKKAKAA
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV
Arabidopsis Description
BZIP23Basic leucine zipper 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.