Factsheet for HORVU1Hr1G067680.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G000950.1	Barley	nucleus	90.67	90.67
TraesCS1A01G311900.1	Wheat	nucleus	87.56	86.78
TraesCS1D01G312200.1	Wheat	nucleus	83.11	82.38
TraesCS1B01G323600.1	Wheat	nucleus	82.67	81.22
EES19742	Sorghum	nucleus	62.67	64.98
Os05t0495200-01	Rice	nucleus	63.56	63.84
Zm00001d038574_P002	Maize	nucleus	63.11	62.01
Zm00001d010667_P001	Maize	nucleus	60.89	58.3
GSMUA_Achr4P00320_001	Banana	nucleus	50.67	55.88
HORVU3Hr1G078550.1	Barley	nucleus	48.44	51.17
GSMUA_Achr4P10150_001	Banana	nucleus	49.78	49.34
HORVU7Hr1G117170.1	Barley	nucleus	38.67	43.28
HORVU7Hr1G117010.1	Barley	nucleus	36.44	42.71
CDY23178	Canola	nucleus	33.78	40.43
KRG89001	Soybean	nucleus	43.11	40.42
HORVU6Hr1G002780.1	Barley	nucleus	21.33	39.67
CDY60641	Canola	nucleus	32.0	38.3
HORVU5Hr1G116780.1	Barley	nucleus	36.0	37.85
Bra033464.1-P	Field mustard	nucleus	33.78	37.44
VIT_13s0158g00380.t01	Wine grape	nucleus	46.67	36.71
HORVU7Hr1G117020.4	Barley	nucleus	40.89	35.25
HORVU5Hr1G005780.2	Barley	nucleus	41.78	34.94
Bra006886.1-P	Field mustard	extracellular	21.78	32.45
AT3G51960.2	Thale cress	nucleus	32.0	31.58
HORVU1Hr1G072090.1	Barley	plastid	19.11	25.29

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU1Hr1G067680	EnsemblPlants:HORVU1Hr1G067680.1	InterPro:IPR004827	UniProt:M0URC4	PFAM:PF07716	PFscan:PS50217
PANTHER:PTHR23334	PANTHER:PTHR23334:SF25	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000295EF46	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:478699620..478701412

Molecular Weight (calculated)

24012.0 Da

IEP (calculated)

5.541

GRAVY (calculated)

-0.402

Length

225 amino acids

Sequence
(BLAST)

001: MDDGVDLPSQ FLFSNSEMPG AFDDLLADAA ATCTHTHTCN PPGPSATMHT HTCLHTHTHQ LFAAGSEDDD AARPRRPLGN REAVRKYREK KKAHAAFLEE
101: EVKKLRAANQ QLLRRLQGHA TLEAEVARLR GLLSDVRAKI DAEVVAGAFP FQKQCSVGSV ACTDPTLCFN NGNSEVGGAC WGDSSGPASA DCGLDEDANG
201: AAAREVDAPG RPVRAMDVVE LCFPS

Best Arabidopsis Sequence Match ( AT2G16770.1 )
(BLAST)

001: MDDGELEFSN SNMGGELPSC SMDSFFDELL RDSHACTHTH TCNPPGPENT HTHTCLHVHT KILPDKVSTD DTSESSGKKR PLGNREAVRK YREKKKAKAA
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV

Arabidopsis Description

BZIP23Basic leucine zipper 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.