Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19742 | Sorghum | nucleus | 76.86 | 81.11 |
| Zm00001d010667_P001 | Maize | nucleus | 77.29 | 75.32 |
| Os05t0495200-01 | Rice | nucleus | 66.81 | 68.3 |
| TraesCS1D01G312200.1 | Wheat | nucleus | 65.94 | 66.52 |
| HORVU0Hr1G000950.1 | Barley | nucleus | 65.07 | 66.22 |
| TraesCS1B01G323600.1 | Wheat | nucleus | 65.07 | 65.07 |
| TraesCS1A01G311900.1 | Wheat | nucleus | 63.76 | 64.32 |
| HORVU1Hr1G067680.1 | Barley | nucleus | 62.01 | 63.11 |
| GSMUA_Achr4P00320_001 | Banana | nucleus | 51.97 | 58.33 |
| GSMUA_Achr4P10150_001 | Banana | nucleus | 50.66 | 51.1 |
| CDY23178 | Canola | nucleus | 35.37 | 43.09 |
| CDY60641 | Canola | nucleus | 33.62 | 40.96 |
| Bra033464.1-P | Field mustard | nucleus | 35.37 | 39.9 |
| KRG89001 | Soybean | nucleus | 41.48 | 39.58 |
| VIT_13s0158g00380.t01 | Wine grape | nucleus | 47.16 | 37.76 |
| Bra006886.1-P | Field mustard | extracellular | 22.27 | 33.77 |
| Zm00001d014795_P001 | Maize | nucleus | 39.3 | 32.61 |
| AT3G51960.2 | Thale cress | nucleus | 32.31 | 32.46 |
| Zm00001d036400_P001 | Maize | nucleus | 19.21 | 24.31 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100274522 | MapMan:15.5.4.1 | MapMan:15.5.4.3 | ProteinID:AQK86948.1 | ProteinID:AQK86949.1 |
| ProteinID:AQK86950.1 | ProteinID:AQK86951.1 | UniProt:B4G1L8 | EMBL:BT043256 | EMBL:BT060532 | EMBL:BT087956 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | PFAM:PF07716 | PFscan:PS50217 |
| PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00017B7685 | EnsemblPlantsGene:Zm00001d038574 |
| EnsemblPlants:Zm00001d038574_P002 | EnsemblPlants:Zm00001d038574_T002 | InterPro:bZIP | SEG:seg | : | : |
Description
bZIP-transcription factor 73Basic leucine zipper 24
Coordinates
chr6:-:160173085..160174955
Molecular Weight (calculated)
24841.1 Da
IEP (calculated)
5.346
GRAVY (calculated)
-0.490
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDGADLPCQ LLFSHPEMPD SFDEFFNSAT TTCTHTHSCN PPGPSVAMHT HTCLHAHTLV LGSGGEDDDD AREDSAKPRR PLGNREAVRK YREKKKAHAA
101: FLEEEVKKLR AANQQLQRRL QGHAALEAEV ARLRGLLLDI RGKIDAEVGG VLPFQKPCSV GSVACADPAL CFNGNSEVGG GWEESSRPAA ADCRIDEVRG
201: MSREIDVPEG LRHSMDVVAS FVSSDPLAE
101: FLEEEVKKLR AANQQLQRRL QGHAALEAEV ARLRGLLLDI RGKIDAEVGG VLPFQKPCSV GSVACADPAL CFNGNSEVGG GWEESSRPAA ADCRIDEVRG
201: MSREIDVPEG LRHSMDVVAS FVSSDPLAE
001: MDDGELEFSN SNMGGELPSC SMDSFFDELL RDSHACTHTH TCNPPGPENT HTHTCLHVHT KILPDKVSTD DTSESSGKKR PLGNREAVRK YREKKKAKAA
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV
Arabidopsis Description
BZIP23Basic leucine zipper 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.