Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d012821_P003 | |
| Zm00001d014423_P002 | |
| Zm00001d030110_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G16770.1 | Zm00001d012821_P003 | AT1G32230.1 | 19548978 |
| AT2G16770.1 | Zm00001d014423_P002 | AT1G32230.1 | 19548978 |
| AT2G16770.1 | Zm00001d030110_P001 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90398 | Sorghum | nucleus | 88.41 | 89.38 |
| Zm00001d036400_P001 | Maize | nucleus | 53.99 | 82.32 |
| Os06t0716800-01 | Rice | nucleus | 74.28 | 75.37 |
| TraesCS5B01G017700.1 | Wheat | nucleus | 65.94 | 68.68 |
| TraesCS5D01G025800.1 | Wheat | nucleus | 65.58 | 68.05 |
| HORVU5Hr1G005780.2 | Barley | nucleus | 65.22 | 66.91 |
| TraesCS5A01G020700.1 | Wheat | nucleus | 67.39 | 63.48 |
| TraesCS7A01G530300.1 | Wheat | nucleus | 57.25 | 62.45 |
| TraesCS7A01G530400.1 | Wheat | nucleus | 42.39 | 62.23 |
| TraesCS7B01G447900.1 | Wheat | nucleus | 57.25 | 61.96 |
| TraesCS7D01G518100.1 | Wheat | nucleus | 55.8 | 61.6 |
| HORVU6Hr1G002780.1 | Barley | nucleus | 26.81 | 61.16 |
| HORVU5Hr1G116780.1 | Barley | nucleus | 47.1 | 60.75 |
| TraesCS7D01G518200.1 | Wheat | nucleus | 39.13 | 60.67 |
| HORVU7Hr1G117020.4 | Barley | nucleus | 56.88 | 60.15 |
| TraesCS7B01G448000.1 | Wheat | nucleus | 38.04 | 59.66 |
| HORVU7Hr1G117010.1 | Barley | nucleus | 40.58 | 58.33 |
| TraesCS7D01G413100.1 | Wheat | nucleus | 40.58 | 58.03 |
| TraesCS7A01G531800.1 | Wheat | nucleus | 40.94 | 57.95 |
| HORVU7Hr1G117170.1 | Barley | nucleus | 41.67 | 57.21 |
| TraesCS7D01G519200.1 | Wheat | nucleus | 40.22 | 56.63 |
| GSMUA_Achr3P00670_001 | Banana | nucleus | 54.71 | 54.91 |
| GSMUA_Achr1P14830_001 | Banana | nucleus | 53.26 | 53.45 |
| TraesCS7B01G449200.1 | Wheat | nucleus | 39.13 | 52.94 |
| VIT_03s0038g02420.t01 | Wine grape | nucleus | 51.81 | 52.77 |
| Bra037290.1-P | Field mustard | nucleus | 43.84 | 50.63 |
| CDY26786 | Canola | nucleus | 43.48 | 50.21 |
| CDY47478 | Canola | nucleus | 43.48 | 49.79 |
| CDY02237 | Canola | nucleus | 42.75 | 49.37 |
| Bra013048.1-P | Field mustard | nucleus | 42.39 | 48.95 |
| KRH29295 | Soybean | nucleus | 47.83 | 48.89 |
| CDX89748 | Canola | nucleus | 43.48 | 48.39 |
| AT2G16770.1 | Thale cress | nucleus | 43.48 | 48.19 |
| KRH24316 | Soybean | nucleus | 46.01 | 46.86 |
| Solyc01g111580.2.1 | Tomato | nucleus | 45.65 | 46.67 |
| PGSC0003DMT400015830 | Potato | nucleus | 45.29 | 45.96 |
| AT4G35040.2 | Thale cress | nucleus | 42.75 | 45.21 |
| Bra011580.1-P | Field mustard | nucleus | 36.96 | 44.16 |
| GSMUA_Achr7P03840_001 | Banana | golgi, mitochondrion, nucleus, plastid | 52.9 | 43.98 |
| HORVU1Hr1G072090.1 | Barley | plastid | 26.81 | 43.53 |
| Bra034668.1-P | Field mustard | nucleus | 40.22 | 43.53 |
| PGSC0003DMT400031184 | Potato | nucleus | 40.58 | 43.24 |
| CDY17503 | Canola | nucleus | 39.86 | 43.14 |
| CDY52654 | Canola | nucleus | 36.96 | 42.86 |
| TraesCS7A01G420400.1 | Wheat | nucleus | 47.46 | 42.81 |
| TraesCS7B01G321300.1 | Wheat | nucleus | 48.55 | 41.36 |
| CDX76308 | Canola | nucleus | 39.86 | 40.29 |
| CDX69107 | Canola | nucleus | 39.49 | 40.22 |
| Zm00001d038574_P002 | Maize | nucleus | 32.61 | 39.3 |
| Solyc10g055550.1.1 | Tomato | plasma membrane | 40.94 | 37.17 |
| Zm00001d010667_P001 | Maize | nucleus | 31.52 | 37.02 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100273140 | MapMan:15.5.4.1 | MapMan:15.5.4.3 | ProteinID:AQK67206.1 | UniProt:B4FT66 |
| EMBL:BT040304 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EMBL:HQ858662 | InterPro:IPR004827 |
| EMBL:KJ726783 | PFAM:PF07716 | PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI00017B8187 | EnsemblPlantsGene:Zm00001d014795 | EnsemblPlants:Zm00001d014795_P001 | EnsemblPlants:Zm00001d014795_T001 | InterPro:bZIP | SEG:seg |
Description
bZIP-transcription factor 83Basic leucine zipper 19
Coordinates
chr5:+:63482860..63484367
Molecular Weight (calculated)
29126.0 Da
IEP (calculated)
6.494
GRAVY (calculated)
-0.424
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDGDLDFSN PDTYLCPALG TDPPSSCSMD SYFDEILKDT EHHACTHTHT CNPPVHDLSH THTCVHVHTK IVAASPGDDT ADSPSENNTN GSGGNGSNAA
101: SKKRPSGNRA AVRKYREKKK AHTASLEEEV VHLRALNQQL VKKLQSHAAL EAEVARLRCL LVDIRGRIEG EIGAFPYQRP PPAAKNVDLV SGVDQGGFLA
201: GAAAQVTSSC DFRCNDQMYC SPGMQGAVSG QVLGQGACDV SSIQCVGSTR SASTKLPVCG GMDAVPAACL PNVQNK
101: SKKRPSGNRA AVRKYREKKK AHTASLEEEV VHLRALNQQL VKKLQSHAAL EAEVARLRCL LVDIRGRIEG EIGAFPYQRP PPAAKNVDLV SGVDQGGFLA
201: GAAAQVTSSC DFRCNDQMYC SPGMQGAVSG QVLGQGACDV SSIQCVGSTR SASTKLPVCG GMDAVPAACL PNVQNK
001: MEDGELDFSN QEVFSSSEMG ELPPSNCSMD SFFDGLLMDT NAACTHTHTC NPTGPENTHT HTCFHVHTKI LPDESDEKVS TDDTAESCGK KGEKRPLGNR
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
Arabidopsis Description
BZIP19Basic leucine zipper 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY76]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.