Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034668.1-P | Field mustard | nucleus | 98.04 | 98.04 |
| CDX76308 | Canola | nucleus | 97.25 | 90.84 |
| AT4G35040.2 | Thale cress | nucleus | 83.14 | 81.23 |
| CDY52654 | Canola | nucleus | 72.55 | 77.73 |
| CDX69107 | Canola | nucleus | 77.65 | 73.06 |
| CDY02237 | Canola | nucleus | 63.14 | 67.36 |
| CDY26786 | Canola | nucleus | 62.75 | 66.95 |
| CDY47478 | Canola | nucleus | 63.14 | 66.81 |
| CDX89748 | Canola | nucleus | 63.53 | 65.32 |
| KRH29295 | Soybean | nucleus | 58.43 | 55.19 |
| KRH24316 | Soybean | nucleus | 58.04 | 54.61 |
| PGSC0003DMT400015830 | Potato | nucleus | 57.25 | 53.68 |
| Solyc01g111580.2.1 | Tomato | nucleus | 56.47 | 53.33 |
| VIT_03s0038g02420.t01 | Wine grape | nucleus | 56.08 | 52.77 |
| PGSC0003DMT400031184 | Potato | nucleus | 49.41 | 48.65 |
| TraesCS7A01G530400.1 | Wheat | nucleus | 35.29 | 47.87 |
| TraesCS7D01G518200.1 | Wheat | nucleus | 32.94 | 47.19 |
| TraesCS7A01G531800.1 | Wheat | nucleus | 35.69 | 46.67 |
| TraesCS7B01G448000.1 | Wheat | nucleus | 32.16 | 46.59 |
| HORVU6Hr1G002780.1 | Barley | nucleus | 21.96 | 46.28 |
| HORVU5Hr1G116780.1 | Barley | nucleus | 38.43 | 45.79 |
| GSMUA_Achr3P00670_001 | Banana | nucleus | 49.02 | 45.45 |
| TraesCS7D01G518100.1 | Wheat | nucleus | 44.31 | 45.2 |
| TraesCS7D01G519200.1 | Wheat | nucleus | 34.51 | 44.9 |
| TraesCS7B01G449200.1 | Wheat | nucleus | 35.69 | 44.61 |
| TraesCS7B01G447900.1 | Wheat | nucleus | 44.31 | 44.31 |
| HORVU7Hr1G117170.1 | Barley | nucleus | 34.9 | 44.28 |
| HORVU7Hr1G117010.1 | Barley | nucleus | 32.94 | 43.75 |
| TraesCS7D01G413100.1 | Wheat | nucleus | 32.94 | 43.52 |
| GSMUA_Achr1P14830_001 | Banana | nucleus | 45.88 | 42.55 |
| TraesCS5D01G025800.1 | Wheat | nucleus | 44.31 | 42.48 |
| TraesCS7A01G530300.1 | Wheat | nucleus | 41.96 | 42.29 |
| HORVU7Hr1G117020.4 | Barley | nucleus | 43.14 | 42.15 |
| Os06t0716800-01 | Rice | nucleus | 44.71 | 41.91 |
| TraesCS5B01G017700.1 | Wheat | nucleus | 43.14 | 41.51 |
| Solyc10g055550.1.1 | Tomato | plasma membrane | 49.41 | 41.45 |
| CDY23178 | Canola | nucleus | 30.2 | 40.96 |
| CDY60641 | Canola | nucleus | 29.41 | 39.89 |
| Zm00001d014795_P001 | Maize | nucleus | 43.14 | 39.86 |
| HORVU5Hr1G005780.2 | Barley | nucleus | 41.96 | 39.78 |
| EER90398 | Sorghum | nucleus | 42.35 | 39.56 |
| TraesCS5A01G020700.1 | Wheat | nucleus | 43.92 | 38.23 |
| GSMUA_Achr7P03840_001 | Banana | golgi, mitochondrion, nucleus, plastid | 47.45 | 36.45 |
| TraesCS7A01G420400.1 | Wheat | nucleus | 40.78 | 33.99 |
| Zm00001d036400_P001 | Maize | nucleus | 22.75 | 32.04 |
| HORVU1Hr1G072090.1 | Barley | plastid | 20.78 | 31.18 |
| TraesCS7B01G321300.1 | Wheat | nucleus | 38.82 | 30.56 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.3 | GO:A0A078FYU6 | UniProt:A0A078FYU6 | EnsemblPlants:CDY17503 |
| ProteinID:CDY17503 | ProteinID:CDY17503.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00095696001 |
| InterPro:IPR004827 | PFAM:PF07716 | PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0004EE0296 | InterPro:bZIP | SEG:seg | : | : | : |
Description
BnaC03g65600DBnaC03g65600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYU6]
Coordinates
chrLK032074:+:339379..340952
Molecular Weight (calculated)
27620.1 Da
IEP (calculated)
5.569
GRAVY (calculated)
-0.647
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGELEFSN QEVFSTSDMN GLPLTNCSMD TFFDELLMDS NAACTHTHTC NPTGPENAHT HTCFHVHTKI LPEDSDEKVS TDDTAESCGK KGDNKRPLGN
101: REAVRKYREK KKAKAASLED EVARLTAVNH QLVKRLQSQG ALEAEVSRLK CLLVDLRGRI DGEIGSFPYQ KPNVPSFSHM LMNPCNVECG DEVYCLQDGF
201: GGSSQGGVSI NDGCGFDQLQ QCVANQNLVG NGNGSFNSSA NASASNKRKG GHKAA
101: REAVRKYREK KKAKAASLED EVARLTAVNH QLVKRLQSQG ALEAEVSRLK CLLVDLRGRI DGEIGSFPYQ KPNVPSFSHM LMNPCNVECG DEVYCLQDGF
201: GGSSQGGVSI NDGCGFDQLQ QCVANQNLVG NGNGSFNSSA NASASNKRKG GHKAA
001: MEDGELDFSN QEVFSSSEMG ELPPSNCSMD SFFDGLLMDT NAACTHTHTC NPTGPENTHT HTCFHVHTKI LPDESDEKVS TDDTAESCGK KGEKRPLGNR
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
Arabidopsis Description
BZIP19Basic leucine zipper 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY76]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.