Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17503 | Canola | nucleus | 98.04 | 98.04 |
| CDX76308 | Canola | nucleus | 97.25 | 90.84 |
| AT4G35040.2 | Thale cress | nucleus | 81.57 | 79.69 |
| Bra011580.1-P | Field mustard | nucleus | 70.59 | 77.92 |
| Bra013048.1-P | Field mustard | nucleus | 63.14 | 67.36 |
| Bra037290.1-P | Field mustard | nucleus | 61.96 | 66.11 |
| KRH29295 | Soybean | nucleus | 58.43 | 55.19 |
| KRH24316 | Soybean | nucleus | 58.04 | 54.61 |
| PGSC0003DMT400015830 | Potato | nucleus | 57.25 | 53.68 |
| VIT_03s0038g02420.t01 | Wine grape | nucleus | 56.86 | 53.51 |
| Solyc01g111580.2.1 | Tomato | nucleus | 56.47 | 53.33 |
| PGSC0003DMT400031184 | Potato | nucleus | 49.41 | 48.65 |
| TraesCS7A01G530400.1 | Wheat | nucleus | 34.9 | 47.34 |
| TraesCS7A01G531800.1 | Wheat | nucleus | 35.69 | 46.67 |
| TraesCS7D01G518200.1 | Wheat | nucleus | 32.55 | 46.63 |
| HORVU6Hr1G002780.1 | Barley | nucleus | 21.96 | 46.28 |
| TraesCS7B01G448000.1 | Wheat | nucleus | 31.76 | 46.02 |
| HORVU5Hr1G116780.1 | Barley | nucleus | 38.43 | 45.79 |
| GSMUA_Achr3P00670_001 | Banana | nucleus | 49.02 | 45.45 |
| TraesCS7D01G518100.1 | Wheat | nucleus | 44.31 | 45.2 |
| TraesCS7D01G519200.1 | Wheat | nucleus | 34.51 | 44.9 |
| TraesCS7B01G449200.1 | Wheat | nucleus | 35.69 | 44.61 |
| TraesCS7B01G447900.1 | Wheat | nucleus | 44.31 | 44.31 |
| HORVU7Hr1G117170.1 | Barley | nucleus | 34.9 | 44.28 |
| TraesCS7D01G413100.1 | Wheat | nucleus | 33.33 | 44.04 |
| HORVU7Hr1G117010.1 | Barley | nucleus | 32.55 | 43.23 |
| TraesCS5D01G025800.1 | Wheat | nucleus | 44.31 | 42.48 |
| TraesCS7A01G530300.1 | Wheat | nucleus | 41.96 | 42.29 |
| Os06t0716800-01 | Rice | nucleus | 45.1 | 42.28 |
| GSMUA_Achr1P14830_001 | Banana | nucleus | 45.49 | 42.18 |
| HORVU7Hr1G117020.4 | Barley | nucleus | 43.14 | 42.15 |
| TraesCS5B01G017700.1 | Wheat | nucleus | 43.14 | 41.51 |
| Solyc10g055550.1.1 | Tomato | plasma membrane | 49.41 | 41.45 |
| Zm00001d014795_P001 | Maize | nucleus | 43.53 | 40.22 |
| EER90398 | Sorghum | nucleus | 42.75 | 39.93 |
| HORVU5Hr1G005780.2 | Barley | nucleus | 41.96 | 39.78 |
| TraesCS5A01G020700.1 | Wheat | nucleus | 43.92 | 38.23 |
| Bra033464.1-P | Field mustard | nucleus | 30.2 | 37.93 |
| GSMUA_Achr7P03840_001 | Banana | golgi, mitochondrion, nucleus, plastid | 47.06 | 36.14 |
| TraesCS7A01G420400.1 | Wheat | nucleus | 41.18 | 34.31 |
| Zm00001d036400_P001 | Maize | nucleus | 23.14 | 32.6 |
| Bra006886.1-P | Field mustard | extracellular | 19.22 | 32.45 |
| HORVU1Hr1G072090.1 | Barley | plastid | 20.78 | 31.18 |
| TraesCS7B01G321300.1 | Wheat | nucleus | 39.22 | 30.86 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.3 | EnsemblPlantsGene:Bra034668 | EnsemblPlants:Bra034668.1 | EnsemblPlants:Bra034668.1-P |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | UniProt:M4F0S3 | PFAM:PF07716 |
| PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00025461BD | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
AT4G35040 (E=3e-102) | bZIP transcription factor family protein
Coordinates
chrA08:-:12191059..12191962
Molecular Weight (calculated)
27594.0 Da
IEP (calculated)
5.812
GRAVY (calculated)
-0.667
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGELEFSN QEVFSTSDMN GLPLTNCSMD TFFDELLKDS NAACTHTHTC NPTGPENAHT HTCFHVHTKI LPEDSDEKVS TDDTAESCGK KGDNKRPLGN
101: REAVRKYREK KKAKAASLED EVARLTAVNH QLVKRLQSQG ALEAEVSRLK CLLVDLRGRI DGEIGSFPYQ KPSVPSFSHM MMNPCNVECG DEVYCLQDGF
201: GGSSQGGVSI NDGCGFDQLQ QCVANHNLVG NGNGSFNSSA NASASNKRKG GNKAA
101: REAVRKYREK KKAKAASLED EVARLTAVNH QLVKRLQSQG ALEAEVSRLK CLLVDLRGRI DGEIGSFPYQ KPSVPSFSHM MMNPCNVECG DEVYCLQDGF
201: GGSSQGGVSI NDGCGFDQLQ QCVANHNLVG NGNGSFNSSA NASASNKRKG GNKAA
001: MEDGELDFSN QEVFSSSEMG ELPPSNCSMD SFFDGLLMDT NAACTHTHTC NPTGPENTHT HTCFHVHTKI LPDESDEKVS TDDTAESCGK KGEKRPLGNR
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
Arabidopsis Description
BZIP19Basic leucine zipper 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY76]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.