Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d012821_P003 | |
| Zm00001d014423_P002 | |
| Zm00001d030110_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G16770.1 | Zm00001d012821_P003 | AT1G32230.1 | 19548978 |
| AT2G16770.1 | Zm00001d014423_P002 | AT1G32230.1 | 19548978 |
| AT2G16770.1 | Zm00001d030110_P001 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014795_P001 | Maize | nucleus | 82.32 | 53.99 |
| HORVU6Hr1G002780.1 | Barley | nucleus | 32.6 | 48.76 |
| Os06t0716800-01 | Rice | nucleus | 70.72 | 47.06 |
| TraesCS5B01G017700.1 | Wheat | nucleus | 62.98 | 43.02 |
| TraesCS5D01G025800.1 | Wheat | nucleus | 62.98 | 42.86 |
| HORVU5Hr1G005780.2 | Barley | nucleus | 63.54 | 42.75 |
| TraesCS5A01G020700.1 | Wheat | nucleus | 66.3 | 40.96 |
| TraesCS7A01G530300.1 | Wheat | nucleus | 51.38 | 36.76 |
| TraesCS7D01G518100.1 | Wheat | nucleus | 50.28 | 36.4 |
| HORVU7Hr1G117020.4 | Barley | nucleus | 51.93 | 36.02 |
| TraesCS7B01G447900.1 | Wheat | nucleus | 49.72 | 35.29 |
| HORVU5Hr1G116780.1 | Barley | nucleus | 39.78 | 33.64 |
| TraesCS7A01G530400.1 | Wheat | nucleus | 32.6 | 31.38 |
| GSMUA_Achr3P00670_001 | Banana | nucleus | 46.96 | 30.91 |
| GSMUA_Achr1P14830_001 | Banana | nucleus | 46.41 | 30.55 |
| VIT_03s0038g02420.t01 | Wine grape | nucleus | 45.3 | 30.26 |
| TraesCS7A01G531800.1 | Wheat | nucleus | 32.6 | 30.26 |
| TraesCS7D01G519200.1 | Wheat | nucleus | 31.49 | 29.08 |
| TraesCS7D01G413100.1 | Wheat | nucleus | 30.94 | 29.02 |
| Bra037290.1-P | Field mustard | nucleus | 37.02 | 28.03 |
| KRH29295 | Soybean | nucleus | 41.44 | 27.78 |
| HORVU7Hr1G117010.1 | Barley | nucleus | 29.28 | 27.6 |
| TraesCS7D01G518200.1 | Wheat | nucleus | 27.07 | 27.53 |
| CDY47478 | Canola | nucleus | 36.46 | 27.39 |
| CDY26786 | Canola | nucleus | 35.91 | 27.2 |
| CDX89748 | Canola | nucleus | 37.02 | 27.02 |
| AT2G16770.1 | Thale cress | nucleus | 37.02 | 26.91 |
| HORVU7Hr1G117170.1 | Barley | nucleus | 29.83 | 26.87 |
| CDY02237 | Canola | nucleus | 35.36 | 26.78 |
| Solyc01g111580.2.1 | Tomato | nucleus | 39.78 | 26.67 |
| PGSC0003DMT400015830 | Potato | nucleus | 39.78 | 26.47 |
| Bra013048.1-P | Field mustard | nucleus | 34.81 | 26.36 |
| KRH24316 | Soybean | nucleus | 39.23 | 26.2 |
| TraesCS7B01G449200.1 | Wheat | nucleus | 29.28 | 25.98 |
| TraesCS7B01G448000.1 | Wheat | nucleus | 24.86 | 25.57 |
| AT4G35040.2 | Thale cress | nucleus | 36.46 | 25.29 |
| GSMUA_Achr7P03840_001 | Banana | golgi, mitochondrion, nucleus, plastid | 45.3 | 24.7 |
| TraesCS7A01G420400.1 | Wheat | nucleus | 41.44 | 24.51 |
| PGSC0003DMT400031184 | Potato | nucleus | 34.25 | 23.94 |
| Bra034668.1-P | Field mustard | nucleus | 32.6 | 23.14 |
| TraesCS7B01G321300.1 | Wheat | nucleus | 40.88 | 22.84 |
| CDY17503 | Canola | nucleus | 32.04 | 22.75 |
| Bra011580.1-P | Field mustard | nucleus | 28.18 | 22.08 |
| CDY52654 | Canola | nucleus | 28.18 | 21.43 |
| CDX69107 | Canola | nucleus | 32.04 | 21.4 |
| CDX76308 | Canola | nucleus | 32.04 | 21.25 |
| Solyc10g055550.1.1 | Tomato | plasma membrane | 34.81 | 20.72 |
| Zm00001d038574_P002 | Maize | nucleus | 24.31 | 19.21 |
| Zm00001d010667_P001 | Maize | nucleus | 22.65 | 17.45 |
| HORVU1Hr1G072090.1 | Barley | plastid | 11.05 | 11.76 |
Protein Annotations
| EnsemblPlants:Zm00001d036400_P001 | EnsemblPlants:Zm00001d036400_T001 | EnsemblPlantsGene:Zm00001d036400 | PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | ProteinID:AQK80915.1 |
| SEG:seg | UniParc:UPI000842A083 | UniProt:A0A1D6LMW8 | MapMan:35.1 | : | : |
Description
bZIP-transcription factor 106Basic leucine zipper 19
Coordinates
chr6:+:86826580..86827383
Molecular Weight (calculated)
18961.0 Da
IEP (calculated)
5.994
GRAVY (calculated)
-0.420
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDGDLDFSN PDTYLCPALG TDPPSSCSMD SYFDEILKDT EHLACTHTHT CNPPVHDLSH THTCVHVHTK IVAASPGDAE SPSENNSNGN AASKKRPSGN
101: RAAVRNAAAQ VANSCDFRCN HQMYCNPGMQ GAISGQVLGQ GACDVASMQC IGSTKSGSTK LPVCGGLDTL PAVCLPNVEK K
101: RAAVRNAAAQ VANSCDFRCN HQMYCNPGMQ GAISGQVLGQ GACDVASMQC IGSTKSGSTK LPVCGGLDTL PAVCLPNVEK K
001: MEDGELDFSN QEVFSSSEMG ELPPSNCSMD SFFDGLLMDT NAACTHTHTC NPTGPENTHT HTCFHVHTKI LPDESDEKVS TDDTAESCGK KGEKRPLGNR
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
Arabidopsis Description
BZIP19Basic leucine zipper 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY76]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.