Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G16770.1 | KRH39574 | AT1G32230.1 | 19548978 |
| AT2G16770.1 | KRH74370 | AT1G32230.1 | 19548978 |
| AT2G16770.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24316 | Soybean | nucleus | 84.81 | 84.5 |
| VIT_03s0038g02420.t01 | Wine grape | nucleus | 65.19 | 64.94 |
| CDY26786 | Canola | nucleus | 56.67 | 64.02 |
| CDY47478 | Canola | nucleus | 56.3 | 63.07 |
| Bra013048.1-P | Field mustard | nucleus | 55.19 | 62.34 |
| Bra037290.1-P | Field mustard | nucleus | 55.19 | 62.34 |
| CDX89748 | Canola | nucleus | 57.04 | 62.1 |
| CDY02237 | Canola | nucleus | 54.81 | 61.92 |
| Solyc01g111580.2.1 | Tomato | nucleus | 61.48 | 61.48 |
| AT2G16770.1 | Thale cress | nucleus | 56.3 | 61.04 |
| PGSC0003DMT400015830 | Potato | nucleus | 61.48 | 61.03 |
| AT4G35040.2 | Thale cress | nucleus | 57.78 | 59.77 |
| Bra011580.1-P | Field mustard | nucleus | 50.0 | 58.44 |
| CDY17503 | Canola | nucleus | 55.19 | 58.43 |
| Bra034668.1-P | Field mustard | nucleus | 55.19 | 58.43 |
| CDY52654 | Canola | nucleus | 50.37 | 57.14 |
| CDX76308 | Canola | nucleus | 54.44 | 53.85 |
| PGSC0003DMT400031184 | Potato | nucleus | 51.48 | 53.67 |
| CDX69107 | Canola | nucleus | 52.59 | 52.4 |
| TraesCS7A01G530400.1 | Wheat | nucleus | 35.56 | 51.06 |
| GSMUA_Achr3P00670_001 | Banana | nucleus | 50.37 | 49.45 |
| TraesCS7D01G518200.1 | Wheat | nucleus | 32.59 | 49.44 |
| TraesCS7B01G448000.1 | Wheat | nucleus | 32.22 | 49.43 |
| TraesCS7A01G531800.1 | Wheat | nucleus | 35.19 | 48.72 |
| EER90398 | Sorghum | nucleus | 48.52 | 47.99 |
| Zm00001d014795_P001 | Maize | nucleus | 48.89 | 47.83 |
| TraesCS7D01G519200.1 | Wheat | nucleus | 34.44 | 47.45 |
| Os06t0716800-01 | Rice | nucleus | 47.78 | 47.43 |
| GSMUA_Achr1P14830_001 | Banana | nucleus | 48.15 | 47.27 |
| HORVU7Hr1G117170.1 | Barley | nucleus | 35.19 | 47.26 |
| TraesCS7D01G413100.1 | Wheat | nucleus | 33.7 | 47.15 |
| HORVU6Hr1G002780.1 | Barley | nucleus | 21.11 | 47.11 |
| HORVU7Hr1G117010.1 | Barley | nucleus | 32.96 | 46.35 |
| Solyc10g055550.1.1 | Tomato | plasma membrane | 51.85 | 46.05 |
| TraesCS7B01G449200.1 | Wheat | nucleus | 34.44 | 45.59 |
| TraesCS5D01G025800.1 | Wheat | nucleus | 44.81 | 45.49 |
| HORVU5Hr1G005780.2 | Barley | nucleus | 44.44 | 44.61 |
| HORVU5Hr1G116780.1 | Barley | nucleus | 35.19 | 44.39 |
| TraesCS5B01G017700.1 | Wheat | nucleus | 43.33 | 44.15 |
| TraesCS7D01G518100.1 | Wheat | nucleus | 40.74 | 44.0 |
| TraesCS7B01G447900.1 | Wheat | nucleus | 40.37 | 42.75 |
| TraesCS7A01G530300.1 | Wheat | nucleus | 40.0 | 42.69 |
| Zm00001d036400_P001 | Maize | nucleus | 27.78 | 41.44 |
| HORVU7Hr1G117020.4 | Barley | nucleus | 40.0 | 41.38 |
| TraesCS5A01G020700.1 | Wheat | nucleus | 44.44 | 40.96 |
| GSMUA_Achr7P03840_001 | Banana | golgi, mitochondrion, nucleus, plastid | 49.26 | 40.06 |
| KRG89001 | Soybean | nucleus | 32.59 | 36.67 |
| TraesCS7B01G321300.1 | Wheat | nucleus | 37.78 | 31.48 |
| TraesCS7A01G420400.1 | Wheat | nucleus | 35.19 | 31.05 |
| HORVU1Hr1G072090.1 | Barley | plastid | 18.52 | 29.41 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.3 | EntrezGene:778149 | EMBL:ACUP02006797 | ncoils:Coil | EnsemblPlantsGene:GLYMA_11G108100 |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | UniProt:I1LJ22 | InterPro:IPR004827 | ProteinID:KRH29294.1 | EnsemblPlants:KRH29295 |
| ProteinID:KRH29295 | ProteinID:KRH29295.1 | PFAM:PF07716 | PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI0001BA854C | InterPro:bZIP | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr11:+:8245038..8247611
Molecular Weight (calculated)
29317.4 Da
IEP (calculated)
6.576
GRAVY (calculated)
-0.628
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDGELDFSN HEVFSSPNMG ELPSSGSMDS FFDELLKDTH ACTHTHTCNP PGPDFSHTHT CYHVHTKIVP APEEDQVATD DTAESAEKKS SSKKRPLGNK
101: EAVRKYREKK KARAASLEDE VVKLRALNQH LMKKLQGQAA LEAEIARLKC LLVDIRGRIE GEIGSFPYQK TTTTTPNPVA GSYVMNPCNL PCDDRVYCLH
201: PDGRIGETAA LNGEEFDGCE FENLQCLASQ NLGLKDLRAC GVGVGHTGSN VNSSALSKKR KGGSRAATAG
101: EAVRKYREKK KARAASLEDE VVKLRALNQH LMKKLQGQAA LEAEIARLKC LLVDIRGRIE GEIGSFPYQK TTTTTPNPVA GSYVMNPCNL PCDDRVYCLH
201: PDGRIGETAA LNGEEFDGCE FENLQCLASQ NLGLKDLRAC GVGVGHTGSN VNSSALSKKR KGGSRAATAG
001: MDDGELEFSN SNMGGELPSC SMDSFFDELL RDSHACTHTH TCNPPGPENT HTHTCLHVHT KILPDKVSTD DTSESSGKKR PLGNREAVRK YREKKKAKAA
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV
Arabidopsis Description
BZIP23Basic leucine zipper 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.