Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52654 | Canola | nucleus | 84.5 | 96.22 |
| AT4G35040.2 | Thale cress | nucleus | 74.91 | 77.78 |
| CDY17503 | Canola | nucleus | 73.06 | 77.65 |
| CDX76308 | Canola | nucleus | 71.96 | 71.43 |
| CDY26786 | Canola | nucleus | 56.09 | 63.6 |
| CDY47478 | Canola | nucleus | 56.46 | 63.49 |
| CDY02237 | Canola | nucleus | 54.61 | 61.92 |
| CDX89748 | Canola | nucleus | 56.09 | 61.29 |
| VIT_03s0038g02420.t01 | Wine grape | nucleus | 52.77 | 52.77 |
| KRH29295 | Soybean | nucleus | 52.4 | 52.59 |
| PGSC0003DMT400015830 | Potato | nucleus | 52.77 | 52.57 |
| Solyc01g111580.2.1 | Tomato | nucleus | 52.03 | 52.22 |
| KRH24316 | Soybean | nucleus | 52.03 | 52.03 |
| PGSC0003DMT400031184 | Potato | nucleus | 45.76 | 47.88 |
| TraesCS7A01G530400.1 | Wheat | nucleus | 32.1 | 46.28 |
| TraesCS7B01G448000.1 | Wheat | nucleus | 29.89 | 46.02 |
| TraesCS7D01G518200.1 | Wheat | nucleus | 29.52 | 44.94 |
| TraesCS7A01G531800.1 | Wheat | nucleus | 31.73 | 44.1 |
| GSMUA_Achr3P00670_001 | Banana | nucleus | 44.28 | 43.64 |
| TraesCS7D01G519200.1 | Wheat | nucleus | 31.37 | 43.37 |
| HORVU6Hr1G002780.1 | Barley | nucleus | 19.19 | 42.98 |
| HORVU7Hr1G117010.1 | Barley | nucleus | 30.26 | 42.71 |
| HORVU7Hr1G117170.1 | Barley | nucleus | 31.37 | 42.29 |
| Os06t0716800-01 | Rice | nucleus | 42.44 | 42.28 |
| TraesCS7D01G413100.1 | Wheat | nucleus | 29.89 | 41.97 |
| GSMUA_Achr1P14830_001 | Banana | nucleus | 42.44 | 41.82 |
| TraesCS7B01G449200.1 | Wheat | nucleus | 31.37 | 41.67 |
| HORVU5Hr1G116780.1 | Barley | nucleus | 32.84 | 41.59 |
| TraesCS7B01G447900.1 | Wheat | nucleus | 39.11 | 41.57 |
| Solyc10g055550.1.1 | Tomato | plasma membrane | 46.49 | 41.45 |
| TraesCS7D01G518100.1 | Wheat | nucleus | 38.01 | 41.2 |
| TraesCS5D01G025800.1 | Wheat | nucleus | 40.22 | 40.98 |
| TraesCS5B01G017700.1 | Wheat | nucleus | 39.85 | 40.75 |
| TraesCS7A01G530300.1 | Wheat | nucleus | 37.64 | 40.32 |
| EER90398 | Sorghum | nucleus | 40.22 | 39.93 |
| Zm00001d014795_P001 | Maize | nucleus | 40.22 | 39.49 |
| HORVU7Hr1G117020.4 | Barley | nucleus | 38.01 | 39.46 |
| CDY23178 | Canola | nucleus | 26.94 | 38.83 |
| HORVU5Hr1G005780.2 | Barley | nucleus | 38.38 | 38.66 |
| CDY60641 | Canola | nucleus | 26.2 | 37.77 |
| TraesCS5A01G020700.1 | Wheat | nucleus | 40.22 | 37.2 |
| GSMUA_Achr7P03840_001 | Banana | golgi, mitochondrion, nucleus, plastid | 43.17 | 35.24 |
| TraesCS7A01G420400.1 | Wheat | nucleus | 36.53 | 32.35 |
| Zm00001d036400_P001 | Maize | nucleus | 21.4 | 32.04 |
| HORVU1Hr1G072090.1 | Barley | plastid | 18.45 | 29.41 |
| TraesCS7B01G321300.1 | Wheat | nucleus | 35.06 | 29.32 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.3 | GO:A0A078BXN0 | EnsemblPlants:CDX69107 | ProteinID:CDX69107 |
| ProteinID:CDX69107.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00130890001 | InterPro:IPR004827 |
| PFAM:PF07716 | PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EB3546 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaC01g03460D
Coordinates
chrLK031789:+:2958473..2960177
Molecular Weight (calculated)
29292.7 Da
IEP (calculated)
6.034
GRAVY (calculated)
-0.824
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGELEFSN QEVFSSSDVV GGLPPSNGSI DSFFDGLLMD SHHQHQHQHQ QGACTHTHTC NNSTGTADNT HSHTCFHVHT KVLPEDSDEK VSTDDTAESC
101: GKNGEKRPLG NREAVRKYRE KKKAKAASLE DECSRLRGLN QQLVKRLQSQ SALEGEVSRL KCLLVDLRGR IDGEIGSFPY QKPNIPSFSH LVNPCNVQCE
201: DEVYCLGDGF GGGGNSQEGG GGASINEQGL SGCDFDQLQC MTDQNLNGSF NSANVSATNK RKGGHRGPKG A
101: GKNGEKRPLG NREAVRKYRE KKKAKAASLE DECSRLRGLN QQLVKRLQSQ SALEGEVSRL KCLLVDLRGR IDGEIGSFPY QKPNIPSFSH LVNPCNVQCE
201: DEVYCLGDGF GGGGNSQEGG GGASINEQGL SGCDFDQLQC MTDQNLNGSF NSANVSATNK RKGGHRGPKG A
001: MEDGELDFSN QEVFSSSEMG ELPPSNCSMD SFFDGLLMDT NAACTHTHTC NPTGPENTHT HTCFHVHTKI LPDESDEKVS TDDTAESCGK KGEKRPLGNR
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
Arabidopsis Description
BZIP19Basic leucine zipper 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY76]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.