Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60641 | Canola | nucleus | 94.15 | 94.15 |
| Bra033464.1-P | Field mustard | nucleus | 98.94 | 91.63 |
| AT3G51960.2 | Thale cress | nucleus | 71.81 | 59.21 |
| GSMUA_Achr4P00320_001 | Banana | nucleus | 41.49 | 38.24 |
| EES19742 | Sorghum | nucleus | 42.02 | 36.41 |
| Zm00001d038574_P002 | Maize | nucleus | 43.09 | 35.37 |
| Os01t0801901-00 | Rice | nucleus | 40.96 | 34.38 |
| GSMUA_Achr4P10150_001 | Banana | nucleus | 41.49 | 34.36 |
| HORVU0Hr1G000950.1 | Barley | nucleus | 40.96 | 34.22 |
| KRG89001 | Soybean | nucleus | 43.62 | 34.17 |
| KXG33562 | Sorghum | nucleus | 39.36 | 34.1 |
| Os05t0495200-01 | Rice | nucleus | 40.43 | 33.93 |
| TraesCS1D01G312200.1 | Wheat | nucleus | 40.96 | 33.92 |
| HORVU1Hr1G067680.1 | Barley | nucleus | 40.43 | 33.78 |
| TraesCS1B01G323600.1 | Wheat | nucleus | 40.96 | 33.62 |
| TraesCS3A01G330800.1 | Wheat | nucleus | 37.77 | 33.18 |
| CDY26786 | Canola | nucleus | 42.02 | 33.05 |
| TraesCS1A01G311900.1 | Wheat | nucleus | 39.89 | 33.04 |
| CDY47478 | Canola | nucleus | 41.49 | 32.37 |
| CDY02237 | Canola | nucleus | 40.96 | 32.22 |
| Zm00001d010667_P001 | Maize | nucleus | 39.89 | 31.91 |
| CDX89748 | Canola | nucleus | 42.02 | 31.85 |
| TraesCS3D01G324200.1 | Wheat | nucleus | 35.64 | 31.31 |
| HORVU3Hr1G078550.1 | Barley | nucleus | 34.57 | 30.52 |
| VIT_13s0158g00380.t01 | Wine grape | nucleus | 46.28 | 30.42 |
| CDY17503 | Canola | nucleus | 40.96 | 30.2 |
| CDY52654 | Canola | nucleus | 36.7 | 28.99 |
| CDX76308 | Canola | nucleus | 40.96 | 28.21 |
| CDX69107 | Canola | nucleus | 38.83 | 26.94 |
| TraesCS3B01G360900.1 | Wheat | endoplasmic reticulum | 35.64 | 26.48 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.3 | GO:A0A078GEX7 | UniProt:A0A078GEX7 | EnsemblPlants:CDY23178 |
| ProteinID:CDY23178 | ProteinID:CDY23178.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00021713001 | InterPro:IPR004827 |
| PFAM:PF07716 | PFscan:PS50217 | PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0004EF3F3A | InterPro:bZIP | SEG:seg | : | : | : |
Description
BnaA04g05810DBnaA04g05810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEX7]
Coordinates
chrLK032141:-:179512..181317
Molecular Weight (calculated)
21332.0 Da
IEP (calculated)
6.728
GRAVY (calculated)
-0.811
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGEEIEPWA RASGGCSHTH SCNPPGPEDA SHSHTCFHTH THLIIPDSQE NDHSDSSNKR RPCGNREAVR KYREKKKART AYLEDEVKRL QSMNEFLLRK
101: LQSQAIVEAE IIRLRTLLAE MQKTIDDELG GFSFQKQCNG SGFVFKEDGC NVATRNMICE VARVECEEGK TLHEPIHSFV PHSPPFSR
101: LQSQAIVEAE IIRLRTLLAE MQKTIDDELG GFSFQKQCNG SGFVFKEDGC NVATRNMICE VARVECEEGK TLHEPIHSFV PHSPPFSR
001: MFCCCKDCRG NQRVSNFDSL TGVFFGDLEF GPQNQRYIKM NEEEDKDQDR VTRGCSHTHS CNPPGPEDAS HSHTCFHAHT HLIISDQQEN DHSDSSNKKR
101: LCGNREAVRK YREKKKARTA YLEDEVMRLQ SLNEQFLRKL QSQEMVETEL IRLRALLVEM QGKIEVELCS FSFQKQCNGS GFVFKEDGCN LATSNMMCEA
201: ARVECEEGQT LHDPIQSFVP QPPPFSR
101: LCGNREAVRK YREKKKARTA YLEDEVMRLQ SLNEQFLRKL QSQEMVETEL IRLRALLVEM QGKIEVELCS FSFQKQCNGS GFVFKEDGCN LATSNMMCEA
201: ARVECEEGQT LHDPIQSFVP QPPPFSR
Arabidopsis Description
ATBZIP24Basic leucine zipper 24 [Source:UniProtKB/TrEMBL;Acc:F4J5N9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.