Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G324200.1 | Wheat | nucleus | 88.26 | 87.85 |
| TraesCS3A01G330800.1 | Wheat | nucleus | 76.53 | 76.17 |
| TraesCS3B01G360900.1 | Wheat | endoplasmic reticulum | 76.06 | 64.03 |
| Os01t0801901-00 | Rice | nucleus | 54.46 | 51.79 |
| GSMUA_Achr4P00320_001 | Banana | nucleus | 49.3 | 51.47 |
| KXG33562 | Sorghum | nucleus | 50.23 | 49.31 |
| HORVU0Hr1G000950.1 | Barley | nucleus | 51.17 | 48.44 |
| HORVU1Hr1G067680.1 | Barley | nucleus | 51.17 | 48.44 |
| GSMUA_Achr4P10150_001 | Banana | nucleus | 50.7 | 47.58 |
| HORVU7Hr1G117010.1 | Barley | nucleus | 33.8 | 37.5 |
| HORVU7Hr1G117170.1 | Barley | nucleus | 34.27 | 36.32 |
| KRG89001 | Soybean | nucleus | 39.91 | 35.42 |
| CDY23178 | Canola | nucleus | 30.52 | 34.57 |
| VIT_13s0158g00380.t01 | Wine grape | nucleus | 44.6 | 33.22 |
| CDY60641 | Canola | nucleus | 28.64 | 32.45 |
| HORVU6Hr1G002780.1 | Barley | nucleus | 18.31 | 32.23 |
| Bra033464.1-P | Field mustard | nucleus | 30.52 | 32.02 |
| HORVU7Hr1G117020.4 | Barley | nucleus | 38.03 | 31.03 |
| HORVU5Hr1G005780.2 | Barley | nucleus | 38.97 | 30.86 |
| HORVU5Hr1G116780.1 | Barley | nucleus | 30.99 | 30.84 |
| Bra006886.1-P | Field mustard | extracellular | 21.6 | 30.46 |
| AT3G51960.2 | Thale cress | nucleus | 28.17 | 26.32 |
| HORVU1Hr1G072090.1 | Barley | plastid | 19.72 | 24.71 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU3Hr1G078550 | EnsemblPlants:HORVU3Hr1G078550.1 | InterPro:IPR004827 | UniProt:M0X2P6 | PFAM:PF07716 | PFscan:PS50217 |
| PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0002960603 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:579045376..579047319
Molecular Weight (calculated)
23013.1 Da
IEP (calculated)
5.124
GRAVY (calculated)
-0.172
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDGLYLPIP SHLLFPYPEI SHGFDEFLAC THTHSCPSWS SPAAAHTHTC LHAHTQVVAS GEDYAVEQDE LRNPRKPLGN REAVRKYRQK KKAHAAFLEE
101: EVKKLRAANQ QLLRRLQGHA ALEAEVARLT SLLLDVRGKI DEAEIGALPF DERCSFGSVV CTAAELTPCF DASGAEVAAV REAGDVDDGG IVSGELGVPE
201: VVDAVASFVN SVA
101: EVKKLRAANQ QLLRRLQGHA ALEAEVARLT SLLLDVRGKI DEAEIGALPF DERCSFGSVV CTAAELTPCF DASGAEVAAV REAGDVDDGG IVSGELGVPE
201: VVDAVASFVN SVA
001: MDDGELEFSN SNMGGELPSC SMDSFFDELL RDSHACTHTH TCNPPGPENT HTHTCLHVHT KILPDKVSTD DTSESSGKKR PLGNREAVRK YREKKKAKAA
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV
Arabidopsis Description
BZIP23Basic leucine zipper 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.