Factsheet for Bra033464.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23178	Canola	nucleus	91.63	98.94
AT3G51960.2	Thale cress	nucleus	66.5	59.21
Bra006886.1-P	Field mustard	extracellular	41.38	55.63
GSMUA_Achr4P00320_001	Banana	nucleus	38.42	38.24
EES19742	Sorghum	nucleus	38.92	36.41
Zm00001d038574_P002	Maize	nucleus	39.9	35.37
Os01t0801901-00	Rice	nucleus	38.42	34.82
GSMUA_Achr4P10150_001	Banana	nucleus	38.92	34.8
KRG89001	Soybean	nucleus	40.89	34.58
HORVU0Hr1G000950.1	Barley	nucleus	37.93	34.22
KXG33562	Sorghum	nucleus	36.45	34.1
Os05t0495200-01	Rice	nucleus	37.44	33.93
TraesCS1D01G312200.1	Wheat	nucleus	37.93	33.92
Bra037290.1-P	Field mustard	nucleus	39.9	33.89
HORVU1Hr1G067680.1	Barley	nucleus	37.44	33.78
TraesCS1B01G323600.1	Wheat	nucleus	37.93	33.62
TraesCS1A01G311900.1	Wheat	nucleus	36.95	33.04
TraesCS3A01G330800.1	Wheat	nucleus	34.48	32.71
Bra013048.1-P	Field mustard	nucleus	37.93	32.22
Zm00001d010667_P001	Maize	nucleus	36.95	31.91
TraesCS3D01G324200.1	Wheat	nucleus	33.0	31.31
VIT_13s0158g00380.t01	Wine grape	nucleus	43.35	30.77
HORVU3Hr1G078550.1	Barley	nucleus	32.02	30.52
Bra011580.1-P	Field mustard	nucleus	34.48	30.3
Bra034668.1-P	Field mustard	nucleus	37.93	30.2
TraesCS3B01G360900.1	Wheat	endoplasmic reticulum	32.51	26.09

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.3	EnsemblPlantsGene:Bra033464	EnsemblPlants:Bra033464.1	EnsemblPlants:Bra033464.1-P
GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0006970	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0042538
InterPro:IPR004827	UniProt:M4EXC7	PFAM:PF07716	PFscan:PS50217	PANTHER:PTHR23334	PANTHER:PTHR23334:SF25
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002543863	InterPro:bZIP	SEG:seg	:

Description

AT3G51960 (E=9e-055) | bZIP family transcription factor

Coordinates

chrA04:+:4338790..4339886

Molecular Weight (calculated)

22956.9 Da

IEP (calculated)

6.638

GRAVY (calculated)

-0.768

Length

203 amino acids

Sequence
(BLAST)

001: MDGEEIEPWA RASGGCSHTH SCNPPGPEDA SHSHTCFHTH THLIIPDSQE NDHSDSSNKR RPCGNREAVR KYREKKKART AYLEDEVKRL QSMNEFLLRK
101: LQSQAIVEAE IIRLRTLLAE MQKTIDDELG GFSFQKQCNG SGFVFKEGQI DHNTISILCN NTDGCNVATR NMICEVARVE CEEGKTLHEP IHSFVPHSPP
201: FSR

Best Arabidopsis Sequence Match ( AT3G51960.1 )
(BLAST)

001: MFCCCKDCRG NQRVSNFDSL TGVFFGDLEF GPQNQRYIKM NEEEDKDQDR VTRGCSHTHS CNPPGPEDAS HSHTCFHAHT HLIISDQQEN DHSDSSNKKR
101: LCGNREAVRK YREKKKARTA YLEDEVMRLQ SLNEQFLRKL QSQEMVETEL IRLRALLVEM QGKIEVELCS FSFQKQCNGS GFVFKEDGCN LATSNMMCEA
201: ARVECEEGQT LHDPIQSFVP QPPPFSR

Arabidopsis Description

ATBZIP24Basic leucine zipper 24 [Source:UniProtKB/TrEMBL;Acc:F4J5N9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.