Factsheet for GSMUA_Achr4P00320_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P10150_001	Banana	nucleus	68.14	61.23
EES19742	Sorghum	nucleus	58.82	55.3
Os01t0801901-00	Rice	nucleus	59.31	54.02
Os05t0495200-01	Rice	nucleus	58.33	53.12
Zm00001d038574_P002	Maize	nucleus	58.33	51.97
HORVU0Hr1G000950.1	Barley	nucleus	56.86	51.56
TraesCS1D01G312200.1	Wheat	nucleus	57.35	51.54
TraesCS3D01G324200.1	Wheat	nucleus	53.92	51.4
TraesCS3A01G330800.1	Wheat	nucleus	53.92	51.4
HORVU1Hr1G067680.1	Barley	nucleus	55.88	50.67
KXG33562	Sorghum	nucleus	53.43	50.23
TraesCS1B01G323600.1	Wheat	nucleus	55.88	49.78
TraesCS1A01G311900.1	Wheat	nucleus	55.39	49.78
HORVU3Hr1G078550.1	Barley	nucleus	51.47	49.3
Zm00001d010667_P001	Maize	nucleus	56.37	48.94
KRG89001	Soybean	nucleus	52.94	45.0
TraesCS3B01G360900.1	Wheat	endoplasmic reticulum	52.94	42.69
VIT_13s0158g00380.t01	Wine grape	nucleus	59.8	42.66
CDY23178	Canola	nucleus	38.24	41.49
CDY60641	Canola	nucleus	37.25	40.43
Bra033464.1-P	Field mustard	nucleus	38.24	38.42
GSMUA_Achr1P14830_001	Banana	nucleus	45.59	33.82
GSMUA_Achr3P00670_001	Banana	nucleus	44.12	32.73
AT3G51960.2	Thale cress	nucleus	36.27	32.46
Bra006886.1-P	Field mustard	extracellular	24.02	32.45
GSMUA_Achr7P03840_001	Banana	golgi, mitochondrion, nucleus, plastid	46.57	28.61

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr4G00320_001	EnsemblPlants:GSMUA_Achr4P00320_001	EnsemblPlants:GSMUA_Achr4T00320_001	InterPro:IPR004827	UniProt:M0SJU9	PFAM:PF07716
PFscan:PS50217	PANTHER:PTHR23334	PANTHER:PTHR23334:SF25	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI00029640B5
InterPro:bZIP	SEG:seg	:	:	:	:

Description

bZIP transcription factor domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G00320_001]

Coordinates

chr4:-:265955..267033

Molecular Weight (calculated)

22615.7 Da

IEP (calculated)

5.813

GRAVY (calculated)

-0.633

Length

204 amino acids

Sequence
(BLAST)

001: MDDGEVDLSS HLLLPSPEMT QSFDEFLRRT TTCTHTHTCN PPGPAAAAHT HTCYHTHTQV FATGEEEGPG EEEPNKSRRR PLGNREAVRK YREKKKAHAA
101: FLEEEVKKLR LLNQQLLRRL QGQAALEAEV VRLRDLLADL RGKIDAEVGG GFPLLLKKCS PAGVHCDSNG QCVEVIDWEG SCVPVVVDCQ IDPNGDDRAE
201: LGDR

Best Arabidopsis Sequence Match ( AT2G16770.1 )
(BLAST)

001: MDDGELEFSN SNMGGELPSC SMDSFFDELL RDSHACTHTH TCNPPGPENT HTHTCLHVHT KILPDKVSTD DTSESSGKKR PLGNREAVRK YREKKKAKAA
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV

Arabidopsis Description

BZIP23Basic leucine zipper 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.