Factsheet for Zm00001d010667_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038574_P002	Maize	nucleus	75.32	77.29
EES19742	Sorghum	nucleus	65.96	71.43
HORVU0Hr1G000950.1	Barley	nucleus	59.57	62.22
TraesCS1D01G312200.1	Wheat	nucleus	59.57	61.67
Os05t0495200-01	Rice	nucleus	58.3	61.16
HORVU1Hr1G067680.1	Barley	nucleus	58.3	60.89
TraesCS1B01G323600.1	Wheat	nucleus	59.15	60.7
TraesCS1A01G311900.1	Wheat	nucleus	58.3	60.35
GSMUA_Achr4P00320_001	Banana	nucleus	48.94	56.37
GSMUA_Achr4P10150_001	Banana	nucleus	48.51	50.22
KRG89001	Soybean	nucleus	41.7	40.83
CDY23178	Canola	nucleus	31.91	39.89
CDY60641	Canola	nucleus	30.64	38.3
Bra033464.1-P	Field mustard	nucleus	31.91	36.95
VIT_13s0158g00380.t01	Wine grape	nucleus	44.26	36.36
Zm00001d014795_P001	Maize	nucleus	37.02	31.52
Bra006886.1-P	Field mustard	extracellular	20.0	31.13
AT3G51960.2	Thale cress	nucleus	28.51	29.39
Zm00001d036400_P001	Maize	nucleus	17.45	22.65

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:100191786	MapMan:15.5.4.1	MapMan:15.5.4.3	ProteinID:AQK94563.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	UniProt:K7VWP5	PFAM:PF07716	PANTHER:PTHR23334
PANTHER:PTHR23334:SF25	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000220B781	EnsemblPlantsGene:Zm00001d010667	EnsemblPlants:Zm00001d010667_P001
EnsemblPlants:Zm00001d010667_T001	InterPro:bZIP	SEG:seg	:	:	:

Description

bZIP-transcription factor 108Basic leucine zipper 24

Coordinates

chr8:-:123641909..123643672

Molecular Weight (calculated)

25093.3 Da

IEP (calculated)

6.172

GRAVY (calculated)

-0.488

Length

235 amino acids

Sequence
(BLAST)

001: MDDGADLPCQ LLFSHPEMPH SFDEFFSSAT TTTTCTHTHS CDPPGPSAAM HTHTCLHTHT QVLGSGGEDD GSAKPRRPLG NREAVRKYRE KKKARAAFLE
101: GEVKKLRAAN QQLVRRLQDH AALEAEVARL RGLLLDVRGR IDAEVGVSPF QRPCSAGSVE CGADPALRFD GSSEVVGGGG WEKSSSPQVA DCRIDEGGGG
201: MSRELDVLEG LRHSIDAGAT FVSSDSLAER SCLPG

Best Arabidopsis Sequence Match ( AT2G16770.1 )
(BLAST)

001: MDDGELEFSN SNMGGELPSC SMDSFFDELL RDSHACTHTH TCNPPGPENT HTHTCLHVHT KILPDKVSTD DTSESSGKKR PLGNREAVRK YREKKKAKAA
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV

Arabidopsis Description

BZIP23Basic leucine zipper 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.