Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23178 | Canola | nucleus | 59.21 | 71.81 |
| CDY60641 | Canola | nucleus | 58.33 | 70.74 |
| Bra033464.1-P | Field mustard | nucleus | 59.21 | 66.5 |
| GSMUA_Achr4P00320_001 | Banana | nucleus | 32.46 | 36.27 |
| EES19742 | Sorghum | nucleus | 31.58 | 33.18 |
| AT2G16770.1 | Thale cress | nucleus | 35.96 | 32.93 |
| KRG89001 | Soybean | nucleus | 34.65 | 32.92 |
| GSMUA_Achr4P10150_001 | Banana | nucleus | 32.46 | 32.6 |
| Os01t0801901-00 | Rice | nucleus | 32.02 | 32.59 |
| Zm00001d038574_P002 | Maize | nucleus | 32.46 | 32.31 |
| HORVU0Hr1G000950.1 | Barley | nucleus | 31.58 | 32.0 |
| HORVU1Hr1G067680.1 | Barley | nucleus | 31.58 | 32.0 |
| TraesCS1D01G312200.1 | Wheat | nucleus | 31.14 | 31.28 |
| TraesCS1B01G323600.1 | Wheat | nucleus | 31.14 | 31.0 |
| KXG33562 | Sorghum | nucleus | 29.39 | 30.88 |
| TraesCS3A01G330800.1 | Wheat | nucleus | 28.95 | 30.84 |
| TraesCS1A01G311900.1 | Wheat | nucleus | 30.7 | 30.84 |
| Os05t0495200-01 | Rice | nucleus | 29.39 | 29.91 |
| VIT_13s0158g00380.t01 | Wine grape | nucleus | 37.28 | 29.72 |
| AT4G35040.2 | Thale cress | nucleus | 33.77 | 29.5 |
| TraesCS3D01G324200.1 | Wheat | nucleus | 27.19 | 28.97 |
| Zm00001d010667_P001 | Maize | nucleus | 29.39 | 28.51 |
| HORVU3Hr1G078550.1 | Barley | nucleus | 26.32 | 28.17 |
| TraesCS3B01G360900.1 | Wheat | endoplasmic reticulum | 27.63 | 24.9 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.3 | EntrezGene:824359 | UniProt:A0A178VG62 | ProteinID:AEE78868.1 |
| ArrayExpress:AT3G51960 | EnsemblPlantsGene:AT3G51960 | RefSeq:AT3G51960 | TAIR:AT3G51960 | RefSeq:AT3G51960-TAIR-G | EnsemblPlants:AT3G51960.2 |
| TAIR:AT3G51960.2 | Symbol:ATBZIP24 | UniProt:F4J5N9 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0006970 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 |
| GO:GO:0009651 | GO:GO:0009987 | GO:GO:0042538 | InterPro:IPR004827 | RefSeq:NP_190764.2 | ProteinID:OAP05437.1 |
| PFAM:PF07716 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0006340 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PFscan:PS50217 | PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0000196FD5 | InterPro:bZIP | : | : | : | : |
Description
ATBZIP24Basic leucine zipper 24 [Source:UniProtKB/TrEMBL;Acc:F4J5N9]
Coordinates
chr3:-:19282390..19284192
Molecular Weight (calculated)
26220.8 Da
IEP (calculated)
6.231
GRAVY (calculated)
-0.820
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MFCCCKDCRG NQRVSNFDSL TGVFFGDLEF GPQNQRYIKM NEEEDKDQDR VTRGCSHTHS CNPPGPEDAS HSHTCFHAHT HLIISQDQQE NDHSDSSNKK
101: RLCGNREAVR KYREKKKART AYLEDEVMRL QSLNEQFLRK LQSQEMVETE LIRLRALLVE MQGKIEVELC SFSFQKQCNG SGFVFKEDGC NLATSNMMCE
201: AARVECEEGQ TLHDPIQSFV PQPPPFSR
101: RLCGNREAVR KYREKKKART AYLEDEVMRL QSLNEQFLRK LQSQEMVETE LIRLRALLVE MQGKIEVELC SFSFQKQCNG SGFVFKEDGC NLATSNMMCE
201: AARVECEEGQ TLHDPIQSFV PQPPPFSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.