Factsheet for HORVU0Hr1G000950.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G067680.1	Barley	nucleus	90.67	90.67
TraesCS1D01G312200.1	Wheat	nucleus	89.78	88.99
TraesCS1B01G323600.1	Wheat	nucleus	88.89	87.34
TraesCS1A01G311900.1	Wheat	nucleus	84.0	83.26
EES19742	Sorghum	nucleus	63.56	65.9
Zm00001d038574_P002	Maize	nucleus	66.22	65.07
Os05t0495200-01	Rice	nucleus	63.11	63.39
Zm00001d010667_P001	Maize	nucleus	62.22	59.57
GSMUA_Achr4P00320_001	Banana	nucleus	51.56	56.86
HORVU3Hr1G078550.1	Barley	nucleus	48.44	51.17
GSMUA_Achr4P10150_001	Banana	nucleus	51.56	51.1
HORVU7Hr1G117170.1	Barley	nucleus	38.22	42.79
HORVU7Hr1G117010.1	Barley	nucleus	36.0	42.19
CDY23178	Canola	nucleus	34.22	40.96
KRG89001	Soybean	nucleus	42.67	40.0
HORVU6Hr1G002780.1	Barley	nucleus	21.33	39.67
CDY60641	Canola	nucleus	32.44	38.83
Bra033464.1-P	Field mustard	nucleus	34.22	37.93
HORVU5Hr1G116780.1	Barley	nucleus	36.0	37.85
VIT_13s0158g00380.t01	Wine grape	nucleus	47.11	37.06
HORVU7Hr1G117020.4	Barley	nucleus	41.78	36.02
HORVU5Hr1G005780.2	Barley	nucleus	40.89	34.2
Bra006886.1-P	Field mustard	extracellular	22.67	33.77
AT3G51960.2	Thale cress	nucleus	32.0	31.58
HORVU1Hr1G072090.1	Barley	plastid	17.78	23.53

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.3	EMBL:AK371968	ncoils:Coil	UniProt:F2E744
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU0Hr1G000950	EnsemblPlants:HORVU0Hr1G000950.1	InterPro:IPR004827	PFAM:PF07716
PFscan:PS50217	PANTHER:PTHR23334	PANTHER:PTHR23334:SF25	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002007CFB
InterPro:bZIP	SEG:seg	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E744]

Coordinates

chrchrUn:-:5674616..5676385

Molecular Weight (calculated)

23973.0 Da

IEP (calculated)

5.759

GRAVY (calculated)

-0.413

Length

225 amino acids

Sequence
(BLAST)

001: MDDGVDLPSQ FLFSHPEMPG AFDDLLADAA ATCTHTHTCN PPGPSAAMHT HTCLHTHTHQ LFAAGSEDDD AARPRRPLGN REAVRKYREK KKAHAAFLEE
101: EVKKLRAANQ QLLRRLQGHA TLEAEVARLR GLLSDVRAKI DAEVAAGGFP FQKQCSVGSV ACTDPTLCFN NGNSEVGGAC WGDSSGPASA DCGLDEDANG
201: AAAREVDAPG RPVRAMDVVE LCFPS

Best Arabidopsis Sequence Match ( AT2G16770.1 )
(BLAST)

001: MDDGELEFSN SNMGGELPSC SMDSFFDELL RDSHACTHTH TCNPPGPENT HTHTCLHVHT KILPDKVSTD DTSESSGKKR PLGNREAVRK YREKKKAKAA
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV

Arabidopsis Description

BZIP23Basic leucine zipper 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.