Factsheet for GSMUA_Achr4P10150_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P00320_001	Banana	nucleus	61.23	68.14
EES19742	Sorghum	nucleus	55.51	58.06
Os01t0801901-00	Rice	nucleus	57.27	58.04
KXG33562	Sorghum	nucleus	52.86	55.3
TraesCS3A01G330800.1	Wheat	nucleus	49.34	52.34
Os05t0495200-01	Rice	nucleus	51.54	52.23
HORVU0Hr1G000950.1	Barley	nucleus	51.1	51.56
TraesCS1D01G312200.1	Wheat	nucleus	51.54	51.54
TraesCS3D01G324200.1	Wheat	nucleus	48.02	50.93
HORVU3Hr1G078550.1	Barley	nucleus	47.58	50.7
Zm00001d038574_P002	Maize	nucleus	51.1	50.66
TraesCS1B01G323600.1	Wheat	nucleus	50.66	50.22
HORVU1Hr1G067680.1	Barley	nucleus	49.34	49.78
TraesCS1A01G311900.1	Wheat	nucleus	49.34	49.34
Zm00001d010667_P001	Maize	nucleus	50.22	48.51
TraesCS3B01G360900.1	Wheat	endoplasmic reticulum	48.02	43.08
CDY23178	Canola	nucleus	34.36	41.49
KRG89001	Soybean	nucleus	43.61	41.25
CDY60641	Canola	nucleus	33.92	40.96
VIT_13s0158g00380.t01	Wine grape	nucleus	50.66	40.21
Bra033464.1-P	Field mustard	nucleus	34.8	38.92
Bra006886.1-P	Field mustard	extracellular	22.91	34.44
AT3G51960.2	Thale cress	nucleus	32.6	32.46
GSMUA_Achr1P14830_001	Banana	nucleus	39.21	32.36
GSMUA_Achr3P00670_001	Banana	nucleus	38.33	31.64
GSMUA_Achr7P03840_001	Banana	golgi, mitochondrion, nucleus, plastid	38.33	26.2

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.3	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G10150_001
EnsemblPlants:GSMUA_Achr4P10150_001	EnsemblPlants:GSMUA_Achr4T10150_001	InterPro:IPR004827	UniProt:M0SMN2	PFAM:PF07716	PFscan:PS50217
PANTHER:PTHR23334	PANTHER:PTHR23334:SF25	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002958B2B	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

bZIP transcription factor domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G10150_001]

Coordinates

chr4:-:7398716..7399399

Molecular Weight (calculated)

25066.5 Da

IEP (calculated)

6.031

GRAVY (calculated)

-0.493

Length

227 amino acids

Sequence
(BLAST)

001: MDDGDVDLSS HLLVSDPEIN QSFDEFLRST STCTHTHTCN LPGPAAATHT HTCYHTHTQV FAAGEGESVG EEEPKRYRKP LGNKEAVRKY REKKKAHAAF
101: LEEEVKKLRL VNQQLLRRLQ GQAALEAEVI RLRNLLVDFR GKIDAELGGF PFQNQCRPGC LQCDADGQCI SQNLAAIDWE GSHVPAITNC QINPSGDIIM
201: RQKPEIAEAV NSMNVVGSLI SSASQTE

Best Arabidopsis Sequence Match ( AT2G16770.1 )
(BLAST)

001: MDDGELEFSN SNMGGELPSC SMDSFFDELL RDSHACTHTH TCNPPGPENT HTHTCLHVHT KILPDKVSTD DTSESSGKKR PLGNREAVRK YREKKKAKAA
101: SLEDEVMRLK AVNNQLLKRL QGQAALEAEV TRLKCLLVDI RGRIDGEIGA FPYQKPAVTN VPYSYMMHPC NMQCDVDNLY CLQNGNNGEG ASMNEQGLNG
201: CEFDQLECLA NQNLAGKEIP VCSNGIGTFT VNGSGVNKRK GEPRAAKAV

Arabidopsis Description

BZIP23Basic leucine zipper 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GTS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.