Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17503 | Canola | nucleus | 81.23 | 83.14 |
| Bra034668.1-P | Field mustard | nucleus | 79.69 | 81.57 |
| Bra011580.1-P | Field mustard | nucleus | 70.11 | 79.22 |
| CDY52654 | Canola | nucleus | 70.5 | 77.31 |
| CDX76308 | Canola | nucleus | 79.69 | 76.19 |
| CDX69107 | Canola | nucleus | 77.78 | 74.91 |
| AT2G16770.1 | Thale cress | nucleus | 67.82 | 71.08 |
| KRH29295 | Soybean | nucleus | 59.77 | 57.78 |
| KRH24316 | Soybean | nucleus | 59.77 | 57.56 |
| VIT_03s0038g02420.t01 | Wine grape | nucleus | 59.39 | 57.2 |
| PGSC0003DMT400015830 | Potato | nucleus | 59.39 | 56.99 |
| Solyc01g111580.2.1 | Tomato | nucleus | 58.62 | 56.67 |
| PGSC0003DMT400031184 | Potato | nucleus | 50.57 | 50.97 |
| TraesCS7B01G448000.1 | Wheat | nucleus | 33.72 | 50.0 |
| TraesCS7A01G530400.1 | Wheat | nucleus | 36.02 | 50.0 |
| TraesCS7D01G518200.1 | Wheat | nucleus | 33.33 | 48.88 |
| HORVU6Hr1G002780.1 | Barley | nucleus | 22.61 | 48.76 |
| TraesCS7A01G531800.1 | Wheat | nucleus | 36.4 | 48.72 |
| HORVU7Hr1G117170.1 | Barley | nucleus | 36.02 | 46.77 |
| Os06t0716800-01 | Rice | nucleus | 48.66 | 46.69 |
| GSMUA_Achr3P00670_001 | Banana | nucleus | 49.04 | 46.55 |
| TraesCS7D01G519200.1 | Wheat | nucleus | 34.87 | 46.43 |
| HORVU5Hr1G116780.1 | Barley | nucleus | 37.93 | 46.26 |
| TraesCS7B01G449200.1 | Wheat | nucleus | 36.02 | 46.08 |
| TraesCS7D01G518100.1 | Wheat | nucleus | 44.06 | 46.0 |
| HORVU7Hr1G117010.1 | Barley | nucleus | 33.72 | 45.83 |
| GSMUA_Achr1P14830_001 | Banana | nucleus | 48.28 | 45.82 |
| TraesCS7B01G447900.1 | Wheat | nucleus | 44.44 | 45.49 |
| TraesCS5D01G025800.1 | Wheat | nucleus | 46.36 | 45.49 |
| TraesCS7D01G413100.1 | Wheat | nucleus | 33.33 | 45.08 |
| TraesCS5B01G017700.1 | Wheat | nucleus | 45.59 | 44.91 |
| Solyc10g055550.1.1 | Tomato | plasma membrane | 51.34 | 44.08 |
| EER90398 | Sorghum | nucleus | 45.59 | 43.59 |
| TraesCS7A01G530300.1 | Wheat | nucleus | 42.15 | 43.48 |
| HORVU7Hr1G117020.4 | Barley | nucleus | 43.3 | 43.3 |
| Zm00001d014795_P001 | Maize | nucleus | 45.21 | 42.75 |
| HORVU5Hr1G005780.2 | Barley | nucleus | 43.68 | 42.38 |
| TraesCS5A01G020700.1 | Wheat | nucleus | 45.98 | 40.96 |
| GSMUA_Achr7P03840_001 | Banana | golgi, mitochondrion, nucleus, plastid | 49.43 | 38.86 |
| Zm00001d036400_P001 | Maize | nucleus | 25.29 | 36.46 |
| TraesCS7A01G420400.1 | Wheat | nucleus | 40.23 | 34.31 |
| AT3G51960.2 | Thale cress | nucleus | 29.5 | 33.77 |
| HORVU1Hr1G072090.1 | Barley | plastid | 20.31 | 31.18 |
| TraesCS7B01G321300.1 | Wheat | nucleus | 38.31 | 30.86 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.3 | EntrezGene:829656 | UniProt:A0A178UVU8 | ProteinID:AEE86454.1 |
| ProteinID:ANM66094.1 | ProteinID:ANM66095.1 | ProteinID:ANM66096.1 | ArrayExpress:AT4G35040 | EnsemblPlantsGene:AT4G35040 | RefSeq:AT4G35040 |
| TAIR:AT4G35040 | RefSeq:AT4G35040-TAIR-G | EnsemblPlants:AT4G35040.2 | EMBL:AY072386 | EMBL:AY086153 | EMBL:BT000160 |
| ProteinID:CAA17769.1 | ProteinID:CAB80221.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010043 | GO:GO:0043565 | InterPro:IPR004827 | RefSeq:NP_001320139.1 |
| RefSeq:NP_001328011.1 | RefSeq:NP_001328012.1 | RefSeq:NP_567974.1 | ProteinID:OAO98156.1 | PFAM:PF07716 | PFscan:PS50217 |
| PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | UniProt:Q8VY76 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00000AC1F8 |
| InterPro:bZIP | Symbol:bZIP19 | SEG:seg | : | : | : |
Description
BZIP19Basic leucine zipper 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY76]
Coordinates
chr4:+:16680209..16682881
Molecular Weight (calculated)
28667.4 Da
IEP (calculated)
5.604
GRAVY (calculated)
-0.721
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGELDFSN QEVFSSSEMG ELPPSNCSMD SFFDGLLMDT NAACTHTHTC NPTGPENTHT HTCFHVHTKI LPDESDEKVS TDDTAESCGK KGEKRPLGNR
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.