Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0854800-03 | |
| Os10t0577800-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G16770.1 | Os03t0854800-03 | AT1G32230.1 | 19548978 |
| AT2G16770.1 | Os10t0577800-01 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90398 | Sorghum | nucleus | 79.04 | 78.75 |
| TraesCS5B01G017700.1 | Wheat | nucleus | 73.53 | 75.47 |
| TraesCS5D01G025800.1 | Wheat | nucleus | 73.16 | 74.81 |
| Zm00001d014795_P001 | Maize | nucleus | 75.37 | 74.28 |
| Zm00001d036400_P001 | Maize | nucleus | 47.06 | 70.72 |
| HORVU5Hr1G005780.2 | Barley | nucleus | 68.01 | 68.77 |
| TraesCS5A01G020700.1 | Wheat | nucleus | 73.53 | 68.26 |
| TraesCS7B01G447900.1 | Wheat | nucleus | 59.56 | 63.53 |
| TraesCS7A01G530400.1 | Wheat | nucleus | 43.75 | 63.3 |
| TraesCS7D01G518100.1 | Wheat | nucleus | 58.09 | 63.2 |
| TraesCS7A01G530300.1 | Wheat | nucleus | 58.09 | 62.45 |
| TraesCS7D01G518200.1 | Wheat | nucleus | 40.44 | 61.8 |
| HORVU5Hr1G116780.1 | Barley | nucleus | 48.16 | 61.22 |
| HORVU7Hr1G117020.4 | Barley | nucleus | 58.09 | 60.54 |
| HORVU6Hr1G002780.1 | Barley | nucleus | 26.47 | 59.5 |
| TraesCS7B01G448000.1 | Wheat | nucleus | 37.87 | 58.52 |
| TraesCS7A01G531800.1 | Wheat | nucleus | 41.91 | 58.46 |
| TraesCS7D01G519200.1 | Wheat | nucleus | 41.54 | 57.65 |
| TraesCS7D01G413100.1 | Wheat | nucleus | 40.81 | 57.51 |
| GSMUA_Achr3P00670_001 | Banana | nucleus | 57.35 | 56.73 |
| HORVU7Hr1G117170.1 | Barley | nucleus | 41.54 | 56.22 |
| HORVU7Hr1G117010.1 | Barley | nucleus | 39.34 | 55.73 |
| GSMUA_Achr1P14830_001 | Banana | nucleus | 55.15 | 54.55 |
| TraesCS7B01G449200.1 | Wheat | nucleus | 39.71 | 52.94 |
| VIT_03s0038g02420.t01 | Wine grape | nucleus | 52.57 | 52.77 |
| Bra037290.1-P | Field mustard | nucleus | 43.38 | 49.37 |
| CDY26786 | Canola | nucleus | 43.01 | 48.95 |
| AT4G35040.2 | Thale cress | nucleus | 46.69 | 48.66 |
| CDY47478 | Canola | nucleus | 43.01 | 48.55 |
| Solyc01g111580.2.1 | Tomato | nucleus | 47.79 | 48.15 |
| CDY02237 | Canola | nucleus | 42.28 | 48.12 |
| KRH29295 | Soybean | nucleus | 47.43 | 47.78 |
| Bra013048.1-P | Field mustard | nucleus | 41.91 | 47.7 |
| PGSC0003DMT400015830 | Potato | nucleus | 47.43 | 47.43 |
| KRH24316 | Soybean | nucleus | 47.06 | 47.23 |
| AT2G16770.1 | Thale cress | nucleus | 43.01 | 46.99 |
| Bra011580.1-P | Field mustard | nucleus | 39.71 | 46.75 |
| CDX89748 | Canola | nucleus | 42.28 | 46.37 |
| Bra034668.1-P | Field mustard | nucleus | 42.28 | 45.1 |
| CDY52654 | Canola | nucleus | 39.34 | 44.96 |
| HORVU1Hr1G072090.1 | Barley | plastid | 27.94 | 44.71 |
| CDY17503 | Canola | nucleus | 41.91 | 44.71 |
| TraesCS7A01G420400.1 | Wheat | nucleus | 50.0 | 44.44 |
| GSMUA_Achr7P03840_001 | Banana | golgi, mitochondrion, nucleus, plastid | 53.31 | 43.67 |
| PGSC0003DMT400031184 | Potato | nucleus | 41.18 | 43.24 |
| CDX69107 | Canola | nucleus | 42.28 | 42.44 |
| CDX76308 | Canola | nucleus | 41.91 | 41.76 |
| TraesCS7B01G321300.1 | Wheat | nucleus | 48.16 | 40.43 |
| Os01t0801901-00 | Rice | nucleus | 31.62 | 38.39 |
| Os05t0495200-01 | Rice | nucleus | 31.62 | 38.39 |
| Solyc10g055550.1.1 | Tomato | plasma membrane | 41.91 | 37.5 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.3 | EntrezGene:4342078 | EMBL:AK071639 | EMBL:AK103968 |
| ProteinID:BAD53586.1 | ProteinID:BAD61716.1 | ProteinID:BAF20505.1 | ProteinID:BAS99513.1 | ncoils:Coil | ProteinID:EEE66367.1 |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | EnsemblPlantsGene:Os06g0716800 | EnsemblPlants:Os06t0716800-01 | PFAM:PF07716 |
| PANTHER:PTHR23334 | PANTHER:PTHR23334:SF25 | UniProt:Q5Z8P6 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0000446DC8 |
| RefSeq:XP_015642505.1 | RefSeq:XP_015642506.1 | InterPro:bZIP | SEG:seg | : | : |
Description
b-ZIP TRANSCRIPTION FACTOR 53Basic leucine zipper domain containing protein. (Os06t0716800-01);Basic leucine zipper domain containing protein. (Os06t0716800-02)
Coordinates
chr6:-:30452461..30456214
Molecular Weight (calculated)
29219.4 Da
IEP (calculated)
6.221
GRAVY (calculated)
-0.476
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDGDLDFSN PDTFLCPAVG GADPDGSCSM DSYFDDILKD TEHHACTHTH TCNPPVHDLS HTHTCVHVHT KIVSAPSDTP SDAAETAESP TENNASKKRP
101: SGNRAAVRKY REKKKAHTAS LEEEVVHLRA LNQQLMKKLQ NHATLEAEVS RLRCLLVDIR GRIEGEIGAF PYQRPVKNID LVSSVDQGSY LGGAQVMNSC
201: DFRCADQMYC SPGMQVRTMG EDGAVSGQVL GQGACDIASI QCQGAKSGSA KLPVCGAMGT MPVGCMPNSE KK
101: SGNRAAVRKY REKKKAHTAS LEEEVVHLRA LNQQLMKKLQ NHATLEAEVS RLRCLLVDIR GRIEGEIGAF PYQRPVKNID LVSSVDQGSY LGGAQVMNSC
201: DFRCADQMYC SPGMQVRTMG EDGAVSGQVL GQGACDIASI QCQGAKSGSA KLPVCGAMGT MPVGCMPNSE KK
001: MEDGELDFSN QEVFSSSEMG ELPPSNCSMD SFFDGLLMDT NAACTHTHTC NPTGPENTHT HTCFHVHTKI LPDESDEKVS TDDTAESCGK KGEKRPLGNR
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
101: EAVRKYREKK KAKAASLEDE VARLRAVNQQ LVKRLQNQAT LEAEVSRLKC LLVDLRGRID GEIGSFPYQK PMAANIPSFS HMMNPCNVQC DDEVYCPQNV
201: FGVNSQEGAS INDQGLSGCD FDQLQCMANQ NLNGNGNGSF SNVNTSVSNK RKGGHRASRA V
Arabidopsis Description
BZIP19Basic leucine zipper 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY76]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.