Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61270.1 | KRH39574 | AT1G32230.1 | 19548978 |
| AT5G61270.1 | KRH74370 | AT1G32230.1 | 19548978 |
| AT5G61270.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56866 | Soybean | nucleus | 73.62 | 70.57 |
| KRH63271 | Soybean | cytosol | 24.41 | 38.04 |
| KRH54632 | Soybean | nucleus | 34.25 | 33.46 |
| VIT_17s0000g06920.t01 | Wine grape | nucleus | 25.59 | 28.63 |
| Solyc06g069590.2.1 | Tomato | cytosol | 22.05 | 28.57 |
| AT5G61280.1 | Thale cress | nucleus | 23.23 | 22.43 |
| KRH50535 | Soybean | nucleus | 18.5 | 14.16 |
| KRH70859 | Soybean | nucleus | 13.78 | 13.16 |
| Os03t0211500-01 | Rice | plasma membrane | 15.75 | 12.82 |
| KRH74999 | Soybean | nucleus | 12.99 | 12.41 |
| KRG89501 | Soybean | nucleus | 16.54 | 12.35 |
| KXG39897 | Sorghum | cytosol | 15.35 | 12.23 |
| TraesCS4B01G250900.1 | Wheat | cytosol | 14.96 | 12.14 |
| TraesCS1A01G057900.1 | Wheat | nucleus | 16.14 | 11.68 |
| TraesCS4D01G250800.1 | Wheat | nucleus | 14.17 | 11.5 |
| Zm00001d028185_P002 | Maize | cytosol | 14.57 | 11.46 |
| HORVU1Hr1G011610.2 | Barley | cytosol | 15.75 | 11.4 |
| TraesCS1B01G075600.1 | Wheat | nucleus | 15.75 | 11.4 |
| Zm00001d048109_P002 | Maize | mitochondrion | 15.75 | 11.17 |
| GSMUA_Achr2P19260_001 | Banana | nucleus | 13.39 | 11.07 |
| OQU75583 | Sorghum | cytosol | 12.2 | 11.07 |
| TraesCS4A01G053800.2 | Wheat | cytosol | 13.39 | 10.9 |
| TraesCS1D01G058700.1 | Wheat | nucleus | 14.96 | 10.83 |
| Zm00001d014455_P001 | Maize | nucleus | 13.78 | 10.09 |
| HORVU4Hr1G068900.21 | Barley | cytosol | 11.81 | 9.49 |
| EER90227 | Sorghum | nucleus | 13.78 | 9.36 |
| CDY23073 | Canola | nucleus | 22.83 | 8.9 |
| Zm00001d015411_P001 | Maize | nucleus | 5.91 | 8.72 |
| Os10t0325400-01 | Rice | cytosol, nucleus | 13.39 | 8.61 |
| Bra012972.1-P | Field mustard | nucleus | 20.47 | 7.76 |
| CDY02159 | Canola | extracellular, golgi | 18.5 | 6.46 |
| AT5G61270.1 | Thale cress | nucleus | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02010335 | EnsemblPlants:KRH03090 | EnsemblPlantsGene:GLYMA_17G076300 | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF8 | ProteinID:KRH03090 |
| ProteinID:KRH03090.1 | SEG:seg | UniParc:UPI000294D33A | UniProt:K7MKF5 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr17:-:5969541..5971529
Molecular Weight (calculated)
29560.1 Da
IEP (calculated)
10.769
GRAVY (calculated)
-1.209
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MENRLHQRRV SFSDSRPTKH HGSSGSRNDK AWNWLPRITS HDDYIRDDEY ITSVAATAFA IHSLEEAELR DLPKMRERSK SSRSQTMRRE ENDIPKRPSY
101: GETSMKRSFG QEPGTKESAF PVRRPSGISP PTPRSLSPAL GYQRQQQGIP LQHKNAKTRP ETWEKAMIKM IQKQYEKMKS KIFSWEFVKM IQAKVQRAME
201: MQNYQNKLAR EDRVAQGAGA GLEDRRRKES EARKKSNKNR KTSKDLVECL CFNS
101: GETSMKRSFG QEPGTKESAF PVRRPSGISP PTPRSLSPAL GYQRQQQGIP LQHKNAKTRP ETWEKAMIKM IQKQYEKMKS KIFSWEFVKM IQAKVQRAME
201: MQNYQNKLAR EDRVAQGAGA GLEDRRRKES EARKKSNKNR KTSKDLVECL CFNS
001: MDNLVKQRRR RVSISENIKT DLPMLSELDI TDYPALNWLK NQSYWYEKND YYNEKESELA VSVAVAAFVI RSMEEADKQK SKRIREEIKR SRTKKSNLVI
101: PNTQVKRLSK SYTQEVKIGE ESFRKKLLEY PSENRRPQEI GSSSGTSGLA SASSKADSWE KSQIKKIRLR YEKMKADIVG WENERKLAAT LLMEKRKSEL
201: EKRKGINNQH YKSKLARIQL IADGAKKQLE EKRRSKEAQV HGKVKKMSRT GKVPNNYFCF RCY
101: PNTQVKRLSK SYTQEVKIGE ESFRKKLLEY PSENRRPQEI GSSSGTSGLA SASSKADSWE KSQIKKIRLR YEKMKADIVG WENERKLAAT LLMEKRKSEL
201: EKRKGINNQH YKSKLARIQL IADGAKKQLE EKRRSKEAQV HGKVKKMSRT GKVPNNYFCF RCY
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FLK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.