Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50535 | Soybean | nucleus | 65.0 | 66.57 |
| KRH74999 | Soybean | nucleus | 35.29 | 45.11 |
| KRH70859 | Soybean | nucleus | 35.0 | 44.74 |
| Bra004372.1-P | Field mustard | cytosol, mitochondrion, nucleus | 12.35 | 39.25 |
| CDX95945 | Canola | cytosol, mitochondrion, nucleus | 12.35 | 39.25 |
| AT1G69325.1 | Thale cress | nucleus | 13.53 | 38.33 |
| Bra038312.1-P | Field mustard | nucleus | 12.06 | 38.32 |
| CDY44060 | Canola | nucleus | 12.06 | 38.32 |
| CDY36418 | Canola | nucleus | 32.06 | 33.75 |
| Zm00001d015411_P001 | Maize | nucleus | 16.76 | 33.14 |
| CDX96876 | Canola | nucleus | 33.24 | 33.04 |
| CDX98136 | Canola | nucleus | 31.47 | 33.02 |
| Bra016720.1-P | Field mustard | nucleus | 32.65 | 32.55 |
| Bra019698.1-P | Field mustard | nucleus | 30.88 | 32.41 |
| OQU75583 | Sorghum | cytosol | 25.88 | 31.43 |
| CDY34554 | Canola | nucleus | 30.88 | 30.7 |
| Solyc05g012550.2.1 | Tomato | nucleus | 33.53 | 29.61 |
| KXG39897 | Sorghum | cytosol | 27.65 | 29.47 |
| VIT_01s0011g00820.t01 | Wine grape | nucleus | 32.65 | 29.44 |
| TraesCS1D01G058700.1 | Wheat | nucleus | 29.71 | 28.77 |
| TraesCS1A01G057900.1 | Wheat | nucleus | 29.12 | 28.21 |
| TraesCS1B01G075600.1 | Wheat | nucleus | 28.82 | 27.92 |
| GSMUA_Achr2P19260_001 | Banana | nucleus | 25.0 | 27.69 |
| Solyc04g005470.2.1 | Tomato | nucleus | 25.59 | 27.62 |
| Os03t0211500-01 | Rice | plasma membrane | 25.29 | 27.56 |
| Zm00001d028185_P002 | Maize | cytosol | 26.18 | 27.55 |
| TraesCS4B01G250900.1 | Wheat | cytosol | 25.29 | 27.48 |
| HORVU1Hr1G011610.2 | Barley | cytosol | 28.24 | 27.35 |
| TraesCS4A01G053800.2 | Wheat | cytosol | 25.0 | 27.24 |
| TraesCS4D01G250800.1 | Wheat | nucleus | 25.0 | 27.16 |
| AT1G13920.4 | Thale cress | nucleus | 29.71 | 26.72 |
| Zm00001d048109_P002 | Maize | mitochondrion | 27.94 | 26.54 |
| HORVU4Hr1G068900.21 | Barley | cytosol | 24.41 | 26.27 |
| Zm00001d014455_P001 | Maize | nucleus | 26.18 | 25.65 |
| EER90227 | Sorghum | nucleus | 27.65 | 25.13 |
| Os10t0325400-01 | Rice | cytosol, nucleus | 27.94 | 24.05 |
| KRH63271 | Soybean | cytosol | 10.29 | 21.47 |
| CDY40911 | Canola | endoplasmic reticulum, mitochondrion, plastid | 12.94 | 21.15 |
| KRH03090 | Soybean | nucleus | 12.35 | 16.54 |
| KRH56866 | Soybean | nucleus | 11.47 | 14.72 |
| KRH54632 | Soybean | nucleus | 11.18 | 14.62 |
Protein Annotations
| EMBL:ACUP02012213 | EnsemblPlants:KRG89501 | EnsemblPlantsGene:GLYMA_20G027100 | EntrezGene:102665803 | InterPro:Remorin_C | ncoils:Coil |
| PANTHER:PTHR31471 | PANTHER:PTHR31471:SF5 | PFAM:PF03763 | ProteinID:KRG89501 | ProteinID:KRG89501.1 | SEG:seg |
| UniParc:UPI000296BA2D | UniProt:K7N102 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:3002023..3006188
Molecular Weight (calculated)
38433.0 Da
IEP (calculated)
10.602
GRAVY (calculated)
-1.094
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: METLMKQIRT KLTGAEEGNK ADLGGSRDQK ITTQKILSFK DKKKAQNWFQ RQFSRSMSHD YDAEMEHATA VAAAAFAIFS QEVSQIQQQK KMREKPLPRG
101: KSKVDDPKPP ISQFGGTSRQ FSGSFKPPND QINNATMDLK RPEKTMTPPS SFGEKVKSST DGKKPEIQAP KRIPTFGDED LVNTGEIKPE TLQLPRVPPP
201: VHQQMPLKPS PPRPPSPPPP IRPTSARPGA NETKADAWER EELEKIKESY EKLLETIDSW EKRKKAKAIR KLNKHQHSES ERKRAKVLKN YQDKMNYISQ
301: IAGGARAQAE ERRRNEVLKA KEKANIIRTT GKIPGPCSCF
101: KSKVDDPKPP ISQFGGTSRQ FSGSFKPPND QINNATMDLK RPEKTMTPPS SFGEKVKSST DGKKPEIQAP KRIPTFGDED LVNTGEIKPE TLQLPRVPPP
201: VHQQMPLKPS PPRPPSPPPP IRPTSARPGA NETKADAWER EELEKIKESY EKLLETIDSW EKRKKAKAIR KLNKHQHSES ERKRAKVLKN YQDKMNYISQ
301: IAGGARAQAE ERRRNEVLKA KEKANIIRTT GKIPGPCSCF
001: MDTLIKQTRR KHPASQEKIR EVGSSTREKK VSARKSVSFK EDKKKPSNWL QKQFSRQMSG QSYDPIGEMD HAAAVAATAY AIATFEETWL ENYHSGLELG
101: PSSSRSKSRS EELLPLEEPR SLSRRFSGQL SFIDSETKDH KPPTLKSPMR KSSSVKKTFS MNLMGDHTKQ NQDSEEKHER QRKPVSEPPR IQPPLRTRSE
201: PRAPPPPPPP LLSPSPLRLP PRETKRQSSE HTSRKDDSTA DAWEKAELSK IKARYEKLNR KIDLWEAKKR EKARRKLDIS EQSELEQRRK RGLQRFREDT
301: EYIEQIAAGA RAQAEKDRQS KEFKVKEKAG VIRSTGKLPG NACCF
101: PSSSRSKSRS EELLPLEEPR SLSRRFSGQL SFIDSETKDH KPPTLKSPMR KSSSVKKTFS MNLMGDHTKQ NQDSEEKHER QRKPVSEPPR IQPPLRTRSE
201: PRAPPPPPPP LLSPSPLRLP PRETKRQSSE HTSRKDDSTA DAWEKAELSK IKARYEKLNR KIDLWEAKKR EKARRKLDIS EQSELEQRRK RGLQRFREDT
301: EYIEQIAAGA RAQAEKDRQS KEFKVKEKAG VIRSTGKLPG NACCF
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT1G13920]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.