Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plasma membrane 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95945 | Canola | cytosol, mitochondrion, nucleus | 96.26 | 96.26 |
| Bra038312.1-P | Field mustard | nucleus | 82.24 | 82.24 |
| AT1G69325.1 | Thale cress | nucleus | 76.64 | 68.33 |
| CDY40911 | Canola | endoplasmic reticulum, mitochondrion, plastid | 91.59 | 47.12 |
| Zm00001d015411_P001 | Maize | nucleus | 33.64 | 20.93 |
| KRH70859 | Soybean | nucleus | 40.19 | 16.17 |
| KRH74999 | Soybean | nucleus | 39.25 | 15.79 |
| Bra019698.1-P | Field mustard | nucleus | 46.73 | 15.43 |
| Bra016720.1-P | Field mustard | nucleus | 44.86 | 14.08 |
| Solyc04g005470.2.1 | Tomato | nucleus | 39.25 | 13.33 |
| OQU75583 | Sorghum | cytosol | 34.58 | 13.21 |
| KRH50535 | Soybean | nucleus | 40.19 | 12.95 |
| KRG89501 | Soybean | nucleus | 39.25 | 12.35 |
| KXG39897 | Sorghum | cytosol | 34.58 | 11.6 |
| Zm00001d028185_P002 | Maize | cytosol | 33.64 | 11.15 |
| VIT_01s0011g00820.t01 | Wine grape | nucleus | 39.25 | 11.14 |
| GSMUA_Achr2P19260_001 | Banana | nucleus | 31.78 | 11.07 |
| Solyc05g012550.2.1 | Tomato | nucleus | 39.25 | 10.91 |
| TraesCS4A01G053800.2 | Wheat | cytosol | 31.78 | 10.9 |
| TraesCS4D01G250800.1 | Wheat | nucleus | 31.78 | 10.86 |
| TraesCS4B01G250900.1 | Wheat | cytosol | 31.78 | 10.86 |
| HORVU1Hr1G011610.2 | Barley | cytosol | 33.64 | 10.26 |
| Zm00001d048109_P002 | Maize | mitochondrion | 33.64 | 10.06 |
| TraesCS1D01G058700.1 | Wheat | nucleus | 32.71 | 9.97 |
| TraesCS1A01G057900.1 | Wheat | nucleus | 32.71 | 9.97 |
| Zm00001d014455_P001 | Maize | nucleus | 31.78 | 9.8 |
| TraesCS1B01G075600.1 | Wheat | nucleus | 31.78 | 9.69 |
| Os10t0325400-01 | Rice | cytosol, nucleus | 34.58 | 9.37 |
| EER90227 | Sorghum | nucleus | 32.71 | 9.36 |
| HORVU4Hr1G068900.21 | Barley | cytosol | 26.17 | 8.86 |
| Os03t0211500-01 | Rice | plasma membrane | 25.23 | 8.65 |
| Bra012972.1-P | Field mustard | nucleus | 13.08 | 2.09 |
Protein Annotations
Description
AT1G69325 (E=5e-038) | remorin family protein
Coordinates
chrA07:+:18307310..18307784
Molecular Weight (calculated)
12480.3 Da
IEP (calculated)
10.540
GRAVY (calculated)
-0.983
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPAVELWKE TEMAKTKTKY EKLCEKIVLW EDKKTKKAKR KLHRTERGVE KTKLKALQRY TEDNERIGII VASARAHAYE SQMKEELKVK QKANLMRTTG
101: RSPSTCL
101: RSPSTCL
001: MNESTVQRAK PEHMAAVVDQ WKETEISKSR KKYEKLSEKI VSWEDKKRKK AKRKLHRTER SVEKTKLKAT QRFRDENERI EIIVASARAH AYESRIKEEL
101: KVKEKANLMR TTGRKPSTCL
101: KVKEKANLMR TTGRKPSTCL
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:F4I0M0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.