Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004372.1-P | Field mustard | cytosol, mitochondrion, nucleus | 68.33 | 76.64 |
| Bra038312.1-P | Field mustard | nucleus | 67.5 | 75.7 |
| CDY44060 | Canola | nucleus | 67.5 | 75.7 |
| CDX95945 | Canola | cytosol, mitochondrion, nucleus | 66.67 | 74.77 |
| CDY40911 | Canola | endoplasmic reticulum, mitochondrion, plastid | 67.5 | 38.94 |
| Zm00001d015411_P001 | Maize | nucleus | 33.33 | 23.26 |
| KRH70859 | Soybean | nucleus | 40.0 | 18.05 |
| KRH74999 | Soybean | nucleus | 38.33 | 17.29 |
| KRH50535 | Soybean | nucleus | 40.0 | 14.46 |
| OQU75583 | Sorghum | cytosol | 32.5 | 13.93 |
| Solyc05g012550.2.1 | Tomato | nucleus | 44.17 | 13.77 |
| KRG89501 | Soybean | nucleus | 38.33 | 13.53 |
| Solyc04g005470.2.1 | Tomato | nucleus | 34.17 | 13.02 |
| AT1G13920.4 | Thale cress | nucleus | 40.83 | 12.96 |
| GSMUA_Achr2P19260_001 | Banana | nucleus | 32.5 | 12.7 |
| KXG39897 | Sorghum | cytosol | 32.5 | 12.23 |
| Zm00001d028185_P002 | Maize | cytosol | 32.5 | 12.07 |
| VIT_01s0011g00820.t01 | Wine grape | nucleus | 36.67 | 11.67 |
| TraesCS4A01G053800.2 | Wheat | cytosol | 30.0 | 11.54 |
| TraesCS4D01G250800.1 | Wheat | nucleus | 30.0 | 11.5 |
| TraesCS4B01G250900.1 | Wheat | cytosol | 30.0 | 11.5 |
| Zm00001d048109_P002 | Maize | mitochondrion | 32.5 | 10.89 |
| Os10t0325400-01 | Rice | cytosol, nucleus | 34.17 | 10.38 |
| HORVU1Hr1G011610.2 | Barley | cytosol | 30.0 | 10.26 |
| TraesCS1A01G057900.1 | Wheat | nucleus | 29.17 | 9.97 |
| TraesCS1D01G058700.1 | Wheat | nucleus | 29.17 | 9.97 |
| TraesCS1B01G075600.1 | Wheat | nucleus | 28.33 | 9.69 |
| EER90227 | Sorghum | nucleus | 30.0 | 9.63 |
| Zm00001d014455_P001 | Maize | nucleus | 27.5 | 9.51 |
| HORVU4Hr1G068900.21 | Barley | cytosol | 25.0 | 9.49 |
| Os03t0211500-01 | Rice | plasma membrane | 22.5 | 8.65 |
| AT5G61280.1 | Thale cress | nucleus | 13.33 | 6.08 |
| AT5G61270.1 | Thale cress | nucleus | 5.83 | 1.91 |
Protein Annotations
| ArrayExpress:AT1G69325 | EnsemblPlants:AT1G69325.1 | EnsemblPlantsGene:AT1G69325 | EntrezGene:843264 | GO:GO:0008150 | InterPro:Remorin_C |
| ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF5 | PFAM:PF03763 | ProteinID:AEE34911.1 | ProteinID:OAP12867.1 |
| RefSeq:AT1G69325 | RefSeq:AT1G69325-TAIR-G | RefSeq:NP_849866.1 | SEG:seg | TAIR:AT1G69325 | TAIR:AT1G69325.1 |
| UniParc:UPI0000197159 | UniProt:A0A178W332 | UniProt:F4I0M0 | MapMan:35.2 | : | : |
Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:F4I0M0]
Coordinates
chr1:+:26063187..26063877
Molecular Weight (calculated)
14239.2 Da
IEP (calculated)
10.844
GRAVY (calculated)
-1.251
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MNESTVQRAK PEHMAAVVDQ WKETEISKSR KKYEKLSEKI VSWEDKKRKK AKRKLHRTER SVEKTKLKAT QRFRDENERI EIIVASARAH AYESRIKEEL
101: KVKEKANLMR TTGRKPSTCL
101: KVKEKANLMR TTGRKPSTCL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.