Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
- plasma membrane 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015411_P001 | Maize | nucleus | 19.87 | 35.47 |
| OQU75583 | Sorghum | cytosol | 30.62 | 33.57 |
| AT1G69325.1 | Thale cress | nucleus | 12.7 | 32.5 |
| Bra004372.1-P | Field mustard | cytosol, mitochondrion, nucleus | 11.07 | 31.78 |
| CDX95945 | Canola | cytosol, mitochondrion, nucleus | 11.07 | 31.78 |
| CDY44060 | Canola | nucleus | 10.42 | 29.91 |
| Bra038312.1-P | Field mustard | nucleus | 10.42 | 29.91 |
| KXG39897 | Sorghum | cytosol | 30.94 | 29.78 |
| KRH70859 | Soybean | nucleus | 25.08 | 28.95 |
| Os03t0211500-01 | Rice | plasma membrane | 28.34 | 27.88 |
| TraesCS4B01G250900.1 | Wheat | cytosol | 28.01 | 27.48 |
| KRH74999 | Soybean | nucleus | 23.78 | 27.44 |
| TraesCS4A01G053800.2 | Wheat | cytosol | 27.69 | 27.24 |
| TraesCS4D01G250800.1 | Wheat | nucleus | 27.69 | 27.16 |
| Zm00001d028185_P002 | Maize | cytosol | 27.04 | 25.7 |
| KRG89501 | Soybean | nucleus | 27.69 | 25.0 |
| Zm00001d048109_P002 | Maize | mitochondrion | 28.99 | 24.86 |
| KRH50535 | Soybean | nucleus | 26.71 | 24.7 |
| HORVU4Hr1G068900.21 | Barley | cytosol | 25.41 | 24.68 |
| TraesCS1A01G057900.1 | Wheat | nucleus | 28.01 | 24.5 |
| TraesCS1D01G058700.1 | Wheat | nucleus | 27.69 | 24.22 |
| HORVU1Hr1G011610.2 | Barley | cytosol | 27.36 | 23.93 |
| TraesCS1B01G075600.1 | Wheat | nucleus | 27.36 | 23.93 |
| Zm00001d014455_P001 | Maize | nucleus | 27.04 | 23.92 |
| Solyc04g005470.2.1 | Tomato | nucleus | 24.1 | 23.49 |
| Os10t0325400-01 | Rice | cytosol, nucleus | 29.32 | 22.78 |
| Solyc05g012550.2.1 | Tomato | nucleus | 28.01 | 22.34 |
| Bra016720.1-P | Field mustard | nucleus | 24.76 | 22.29 |
| CDY36418 | Canola | nucleus | 23.13 | 21.98 |
| CDY34554 | Canola | nucleus | 24.43 | 21.93 |
| CDX96876 | Canola | nucleus | 24.43 | 21.93 |
| Bra019698.1-P | Field mustard | nucleus | 23.13 | 21.91 |
| CDX98136 | Canola | nucleus | 23.13 | 21.91 |
| EER90227 | Sorghum | nucleus | 26.38 | 21.66 |
| KRH63271 | Soybean | cytosol | 11.4 | 21.47 |
| Solyc06g069590.2.1 | Tomato | cytosol | 13.68 | 21.43 |
| VIT_01s0011g00820.t01 | Wine grape | nucleus | 25.41 | 20.69 |
| VIT_17s0000g06920.t01 | Wine grape | nucleus | 14.98 | 20.26 |
| CDY40911 | Canola | endoplasmic reticulum, mitochondrion, plastid | 13.68 | 20.19 |
| AT1G13920.4 | Thale cress | nucleus | 21.5 | 17.46 |
| AT5G61280.1 | Thale cress | nucleus | 13.36 | 15.59 |
| KRH54632 | Soybean | nucleus | 12.7 | 15.0 |
| KRH03090 | Soybean | nucleus | 11.07 | 13.39 |
| KRH56866 | Soybean | nucleus | 10.42 | 12.08 |
| CDY23073 | Canola | nucleus | 16.61 | 7.82 |
| Bra012972.1-P | Field mustard | nucleus | 15.31 | 7.01 |
| CDY02159 | Canola | extracellular, golgi | 14.33 | 6.04 |
| AT5G61270.1 | Thale cress | nucleus | 1.63 | 1.37 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P19260_001 | EnsemblPlants:GSMUA_Achr2T19260_001 | EnsemblPlantsGene:GSMUA_Achr2G19260_001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 |
| PANTHER:PTHR31471:SF5 | PFAM:PF03763 | SEG:seg | UniParc:UPI000295E114 | UniProt:M0S9B7 | MapMan:35.2 |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G19260_001]
Coordinates
chr2:-:19379381..19381357
Molecular Weight (calculated)
35558.8 Da
IEP (calculated)
9.880
GRAVY (calculated)
-1.137
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLSRQEKTS FVERKKTNYW PQRQFSSPIS DVNDVSDMEF AIAVAAAAYA ITSMEEESMN QNKTIEQLMH PTAKTKSKRE DSIDKTPDYI RLIRWFTGKE
101: AREDERESGN SSVKKPVTLP GKLLEEPGAD HTISGKAKET NLTIKRTPTF SDEYLNETGS SSSVHGQNQK GQQASSVIKP TSFSSKENEA KRITNTTNVE
201: TEVDVWEREK MDKIRERYEK EISKTLEWEN AKKLKAKRQL EHKEMDLKLK HSRALREYHN EISRINKTAG GKRALAEERK KNNELKTKEK AHKRHYNRES
301: SLCMFCF
101: AREDERESGN SSVKKPVTLP GKLLEEPGAD HTISGKAKET NLTIKRTPTF SDEYLNETGS SSSVHGQNQK GQQASSVIKP TSFSSKENEA KRITNTTNVE
201: TEVDVWEREK MDKIRERYEK EISKTLEWEN AKKLKAKRQL EHKEMDLKLK HSRALREYHN EISRINKTAG GKRALAEERK KNNELKTKEK AHKRHYNRES
301: SLCMFCF
001: MKLACKAIIS KTLKKPKPSN TSSQVLPPYF SLKMDTLIKQ TRRKHPASQE KIREVGSSTR EKKVSARKSV SFKEDKKKPS NWLQKQFSRQ MSGQSYDPIG
101: EMDHAAAVAA TAYAIATFEE TWLENYHSGL ELGPSSSRSK SRSEELLPLE EPRSLSRRFS GQLSFIDSET KDHKPPTLKS PMRKSSSVKK TFSMNLMGDH
201: TKQNQDSEEK HERQRKPVSE PPRIQPPLRT RSEPRAPPPP PPPLLSPSPL RLPPRETKRQ SSEHTSRKDD STADAWEKAE LSKIKARYEK LNRKIDLWEA
301: KKREKARRKL DISEQSELEQ RRKRGLQRFR EDTEYIEQIA AGARAQAEKD RQSKEFKVKE KAGVIRSTGK LPGNACCF
101: EMDHAAAVAA TAYAIATFEE TWLENYHSGL ELGPSSSRSK SRSEELLPLE EPRSLSRRFS GQLSFIDSET KDHKPPTLKS PMRKSSSVKK TFSMNLMGDH
201: TKQNQDSEEK HERQRKPVSE PPRIQPPLRT RSEPRAPPPP PPPLLSPSPL RLPPRETKRQ SSEHTSRKDD STADAWEKAE LSKIKARYEK LNRKIDLWEA
301: KKREKARRKL DISEQSELEQ RRKRGLQRFR EDTEYIEQIA AGARAQAEKD RQSKEFKVKE KAGVIRSTGK LPGNACCF
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT1G13920]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.