Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 2
- nucleus 4
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96876 | Canola | nucleus | 59.52 | 65.79 |
| CDY34554 | Canola | nucleus | 59.26 | 65.5 |
| Bra016720.1-P | Field mustard | nucleus | 58.99 | 65.4 |
| AT1G69325.1 | Thale cress | nucleus | 12.96 | 40.83 |
| KRH70859 | Soybean | nucleus | 26.72 | 37.97 |
| KRH74999 | Soybean | nucleus | 24.07 | 34.21 |
| KRH50535 | Soybean | nucleus | 29.89 | 34.04 |
| KRG89501 | Soybean | nucleus | 26.72 | 29.71 |
| Zm00001d015411_P001 | Maize | nucleus | 12.96 | 28.49 |
| VIT_01s0011g00820.t01 | Wine grape | nucleus | 27.51 | 27.59 |
| Zm00001d014455_P001 | Maize | nucleus | 23.02 | 25.07 |
| OQU75583 | Sorghum | cytosol | 18.52 | 25.0 |
| Solyc05g012550.2.1 | Tomato | nucleus | 24.6 | 24.16 |
| KXG39897 | Sorghum | cytosol | 20.37 | 24.14 |
| TraesCS1D01G058700.1 | Wheat | nucleus | 22.22 | 23.93 |
| TraesCS1A01G057900.1 | Wheat | nucleus | 21.96 | 23.65 |
| Zm00001d028185_P002 | Maize | cytosol | 19.84 | 23.22 |
| Solyc04g005470.2.1 | Tomato | nucleus | 19.31 | 23.17 |
| TraesCS4A01G053800.2 | Wheat | cytosol | 19.05 | 23.08 |
| HORVU1Hr1G011610.2 | Barley | cytosol | 21.43 | 23.08 |
| TraesCS1B01G075600.1 | Wheat | nucleus | 21.43 | 23.08 |
| TraesCS4D01G250800.1 | Wheat | nucleus | 19.05 | 23.0 |
| EER90227 | Sorghum | nucleus | 22.75 | 22.99 |
| TraesCS4B01G250900.1 | Wheat | cytosol | 18.78 | 22.68 |
| Zm00001d048109_P002 | Maize | mitochondrion | 21.43 | 22.63 |
| GSMUA_Achr2P19260_001 | Banana | nucleus | 17.46 | 21.5 |
| Os03t0211500-01 | Rice | plasma membrane | 17.72 | 21.47 |
| Os10t0325400-01 | Rice | cytosol, nucleus | 21.96 | 21.01 |
| HORVU4Hr1G068900.21 | Barley | cytosol | 16.14 | 19.3 |
| AT5G61280.1 | Thale cress | nucleus | 12.17 | 17.49 |
| AT5G61270.1 | Thale cress | nucleus | 1.32 | 1.37 |
Protein Annotations
| ArrayExpress:AT1G13920 | EnsemblPlants:AT1G13920.4 | EnsemblPlantsGene:AT1G13920 | EntrezGene:837952 | GO:GO:0008150 | InterPro:Remorin_C |
| ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF5 | PFAM:PF03763 | ProteinID:AAD39278.1 | ProteinID:AEE29083.1 |
| ProteinID:ANM59010.1 | RefSeq:AT1G13920 | RefSeq:AT1G13920-TAIR-G | RefSeq:NP_001321407.1 | RefSeq:NP_172845.1 | SEG:seg |
| TAIR:AT1G13920 | Unigene:At.51602 | UniParc:UPI00084876D0 | UniProt:A0A1P8AQT9 | MapMan:35.2 | : |
Description
Remorin family protein [Source:TAIR;Acc:AT1G13920]
Coordinates
chr1:+:4758084..4759754
Molecular Weight (calculated)
43258.5 Da
IEP (calculated)
10.744
GRAVY (calculated)
-1.158
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLACKAIIS KTLKKPKPSN TSSQVLPPYF SLKMDTLIKQ TRRKHPASQE KIREVGSSTR EKKVSARKSV SFKEDKKKPS NWLQKQFSRQ MSGQSYDPIG
101: EMDHAAAVAA TAYAIATFEE TWLENYHSGL ELGPSSSRSK SRSEELLPLE EPRSLSRRFS GQLSFIDSET KDHKPPTLKS PMRKSSSVKK TFSMNLMGDH
201: TKQNQDSEEK HERQRKPVSE PPRIQPPLRT RSEPRAPPPP PPPLLSPSPL RLPPRETKRQ SSEHTSRKDD STADAWEKAE LSKIKARYEK LNRKIDLWEA
301: KKREKARRKL DISEQSELEQ RRKRGLQRFR EDTEYIEQIA AGARAQAEKD RQSKEFKVKE KAGVIRSTGK LPGNACCF
101: EMDHAAAVAA TAYAIATFEE TWLENYHSGL ELGPSSSRSK SRSEELLPLE EPRSLSRRFS GQLSFIDSET KDHKPPTLKS PMRKSSSVKK TFSMNLMGDH
201: TKQNQDSEEK HERQRKPVSE PPRIQPPLRT RSEPRAPPPP PPPLLSPSPL RLPPRETKRQ SSEHTSRKDD STADAWEKAE LSKIKARYEK LNRKIDLWEA
301: KKREKARRKL DISEQSELEQ RRKRGLQRFR EDTEYIEQIA AGARAQAEKD RQSKEFKVKE KAGVIRSTGK LPGNACCF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.