Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95945 | Canola | cytosol, mitochondrion, nucleus | 11.67 | 41.12 |
| Bra004372.1-P | Field mustard | cytosol, mitochondrion, nucleus | 11.14 | 39.25 |
| KRH70859 | Soybean | nucleus | 26.79 | 37.97 |
| KRH50535 | Soybean | nucleus | 33.16 | 37.65 |
| AT1G69325.1 | Thale cress | nucleus | 11.67 | 36.67 |
| CDY44060 | Canola | nucleus | 9.55 | 33.64 |
| Bra038312.1-P | Field mustard | nucleus | 9.55 | 33.64 |
| KRH74999 | Soybean | nucleus | 23.61 | 33.46 |
| KRG89501 | Soybean | nucleus | 29.44 | 32.65 |
| CDX96876 | Canola | nucleus | 29.18 | 32.16 |
| CDY34554 | Canola | nucleus | 29.18 | 32.16 |
| CDX98136 | Canola | nucleus | 27.59 | 32.1 |
| Bra016720.1-P | Field mustard | nucleus | 28.65 | 31.67 |
| Bra019698.1-P | Field mustard | nucleus | 26.79 | 31.17 |
| CDY36418 | Canola | nucleus | 26.53 | 30.96 |
| Solyc05g012550.2.1 | Tomato | nucleus | 31.3 | 30.65 |
| Solyc04g005470.2.1 | Tomato | nucleus | 24.93 | 29.84 |
| Zm00001d015411_P001 | Maize | nucleus | 13.0 | 28.49 |
| OQU75583 | Sorghum | cytosol | 20.69 | 27.86 |
| TraesCS1A01G057900.1 | Wheat | nucleus | 25.73 | 27.64 |
| KXG39897 | Sorghum | cytosol | 23.34 | 27.59 |
| AT1G13920.4 | Thale cress | nucleus | 27.59 | 27.51 |
| TraesCS1D01G058700.1 | Wheat | nucleus | 25.46 | 27.35 |
| HORVU1Hr1G011610.2 | Barley | cytosol | 24.93 | 26.78 |
| TraesCS1B01G075600.1 | Wheat | nucleus | 24.67 | 26.5 |
| Os03t0211500-01 | Rice | plasma membrane | 21.22 | 25.64 |
| GSMUA_Achr2P19260_001 | Banana | nucleus | 20.69 | 25.41 |
| TraesCS4A01G053800.2 | Wheat | cytosol | 20.95 | 25.32 |
| TraesCS4B01G250900.1 | Wheat | cytosol | 20.42 | 24.6 |
| Zm00001d028185_P002 | Maize | cytosol | 20.95 | 24.46 |
| TraesCS4D01G250800.1 | Wheat | nucleus | 20.16 | 24.28 |
| Zm00001d048109_P002 | Maize | mitochondrion | 22.28 | 23.46 |
| Zm00001d014455_P001 | Maize | nucleus | 21.22 | 23.05 |
| EER90227 | Sorghum | nucleus | 22.55 | 22.73 |
| Os10t0325400-01 | Rice | cytosol, nucleus | 23.61 | 22.53 |
| HORVU4Hr1G068900.21 | Barley | cytosol | 18.3 | 21.84 |
| CDY40911 | Canola | endoplasmic reticulum, mitochondrion, plastid | 11.94 | 21.63 |
| VIT_17s0000g06920.t01 | Wine grape | nucleus | 12.73 | 21.15 |
Protein Annotations
| EntrezGene:100249028 | wikigene:100249028 | MapMan:35.2 | ProteinID:CBI27257 | ProteinID:CBI27257.3 | ncoils:Coil |
| UniProt:D7T9T5 | EMBL:FN595752 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0016798 | EntrezGene:LOC100249028 | wikigene:LOC100249028 | PFAM:PF03763 | PRINTS:PR01217 |
| PANTHER:PTHR31471 | PANTHER:PTHR31471:SF5 | InterPro:Remorin_C | SUPFAM:SSF101447 | TIGR:TC68707 | UniParc:UPI0001BE2D34 |
| ArrayExpress:VIT_01s0011g00820 | EnsemblPlantsGene:VIT_01s0011g00820 | EnsemblPlants:VIT_01s0011g00820.t01 | unigene:Vvi.12985 | RefSeq:XP_002271714 | RefSeq:XP_002271714.1 |
| RefSeq:XP_010649468.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:726676..728914
Molecular Weight (calculated)
41372.4 Da
IEP (calculated)
10.770
GRAVY (calculated)
-1.009
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MENLLKQIRA RFPGAGEGNK EAGSSRERKI PLQRTQTFKG ERKGLSWLSR QFASRMSRGH DLENDSEYAT AVAAAAYAVH SLEETRIPDQ KKKSEGPEPS
101: PTRAISKKEG TTSAVLDPGR SSRRLSGEAS LRISDGKERR APIKTAEKTT PPPPPPPPPP PPSVQKTPTV KSAVAPATSM KKAPTEEPSA AGASFSKKPL
201: DKAASRKQDI AAPKPTPPPP PPPPPPPTKE PATRKAQATR GRPIGEIEID AWEKAEMAKI KEKFDKVNGE IASWADKKKK KAKLKLDKIE GALDQKRAKA
301: LRHDRTDINI SKLQAALDQK RAKALRHYRT DIQNIDYVAG GAKAQAEEKR RNEELKVKEK SKIIRETGQF PPTCLCF
101: PTRAISKKEG TTSAVLDPGR SSRRLSGEAS LRISDGKERR APIKTAEKTT PPPPPPPPPP PPSVQKTPTV KSAVAPATSM KKAPTEEPSA AGASFSKKPL
201: DKAASRKQDI AAPKPTPPPP PPPPPPPTKE PATRKAQATR GRPIGEIEID AWEKAEMAKI KEKFDKVNGE IASWADKKKK KAKLKLDKIE GALDQKRAKA
301: LRHDRTDINI SKLQAALDQK RAKALRHYRT DIQNIDYVAG GAKAQAEEKR RNEELKVKEK SKIIRETGQF PPTCLCF
001: MKLACKAIIS KTLKKPKPSN TSSQVLPPYF SLKMDTLIKQ TRRKHPASQE KIREVGSSTR EKKVSARKSV SFKEDKKKPS NWLQKQFSRQ MSGQSYDPIG
101: EMDHAAAVAA TAYAIATFEE TWLENYHSGL ELGPSSSRSK SRSEELLPLE EPRSLSRRFS GQLSFIDSET KDHKPPTLKS PMRKSSSVKK TFSMNLMGDH
201: TKQNQDSEEK HERQRKPVSE PPRIQPPLRT RSEPRAPPPP PPPLLSPSPL RLPPRETKRQ SSEHTSRKDD STADAWEKAE LSKIKARYEK LNRKIDLWEA
301: KKREKARRKL DISEQSELEQ RRKRGLQRFR EDTEYIEQIA AGARAQAEKD RQSKEFKVKE KAGVIRSTGK LPGNACCF
101: EMDHAAAVAA TAYAIATFEE TWLENYHSGL ELGPSSSRSK SRSEELLPLE EPRSLSRRFS GQLSFIDSET KDHKPPTLKS PMRKSSSVKK TFSMNLMGDH
201: TKQNQDSEEK HERQRKPVSE PPRIQPPLRT RSEPRAPPPP PPPLLSPSPL RLPPRETKRQ SSEHTSRKDD STADAWEKAE LSKIKARYEK LNRKIDLWEA
301: KKREKARRKL DISEQSELEQ RRKRGLQRFR EDTEYIEQIA AGARAQAEKD RQSKEFKVKE KAGVIRSTGK LPGNACCF
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT1G13920]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.