Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70859 | Soybean | nucleus | 74.44 | 74.44 |
| Bra038312.1-P | Field mustard | nucleus | 16.54 | 41.12 |
| CDY44060 | Canola | nucleus | 16.54 | 41.12 |
| Bra004372.1-P | Field mustard | cytosol, mitochondrion, nucleus | 15.79 | 39.25 |
| AT1G69325.1 | Thale cress | nucleus | 17.29 | 38.33 |
| CDX95945 | Canola | cytosol, mitochondrion, nucleus | 15.04 | 37.38 |
| KRH50535 | Soybean | nucleus | 45.11 | 36.14 |
| KRG89501 | Soybean | nucleus | 45.11 | 35.29 |
| CDY36418 | Canola | nucleus | 37.22 | 30.65 |
| CDX98136 | Canola | nucleus | 35.71 | 29.32 |
| Bra019698.1-P | Field mustard | nucleus | 35.71 | 29.32 |
| Zm00001d015411_P001 | Maize | nucleus | 18.8 | 29.07 |
| Bra016720.1-P | Field mustard | nucleus | 36.84 | 28.74 |
| CDX96876 | Canola | nucleus | 36.47 | 28.36 |
| CDY34554 | Canola | nucleus | 35.34 | 27.49 |
| Solyc04g005470.2.1 | Tomato | nucleus | 31.58 | 26.67 |
| OQU75583 | Sorghum | cytosol | 26.69 | 25.36 |
| Solyc05g012550.2.1 | Tomato | nucleus | 34.96 | 24.16 |
| AT1G13920.4 | Thale cress | nucleus | 34.21 | 24.07 |
| CDY40911 | Canola | endoplasmic reticulum, mitochondrion, plastid | 18.8 | 24.04 |
| GSMUA_Achr2P19260_001 | Banana | nucleus | 27.44 | 23.78 |
| VIT_01s0011g00820.t01 | Wine grape | nucleus | 33.46 | 23.61 |
| KXG39897 | Sorghum | cytosol | 27.82 | 23.2 |
| Os03t0211500-01 | Rice | plasma membrane | 26.32 | 22.44 |
| Zm00001d028185_P002 | Maize | cytosol | 26.69 | 21.98 |
| Zm00001d048109_P002 | Maize | mitochondrion | 27.82 | 20.67 |
| TraesCS4D01G250800.1 | Wheat | nucleus | 22.93 | 19.49 |
| TraesCS4B01G250900.1 | Wheat | cytosol | 22.56 | 19.17 |
| Zm00001d014455_P001 | Maize | nucleus | 24.81 | 19.02 |
| TraesCS4A01G053800.2 | Wheat | cytosol | 22.18 | 18.91 |
| TraesCS1D01G058700.1 | Wheat | nucleus | 24.81 | 18.8 |
| TraesCS1A01G057900.1 | Wheat | nucleus | 24.44 | 18.52 |
| Os10t0325400-01 | Rice | cytosol, nucleus | 27.07 | 18.23 |
| TraesCS1B01G075600.1 | Wheat | nucleus | 23.68 | 17.95 |
| HORVU1Hr1G011610.2 | Barley | cytosol | 23.31 | 17.66 |
| HORVU4Hr1G068900.21 | Barley | cytosol | 20.68 | 17.41 |
| EER90227 | Sorghum | nucleus | 24.44 | 17.38 |
| KRH63271 | Soybean | cytosol | 10.15 | 16.56 |
| KRH03090 | Soybean | nucleus | 12.41 | 12.99 |
| KRH54632 | Soybean | nucleus | 11.65 | 11.92 |
| KRH56866 | Soybean | nucleus | 11.28 | 11.32 |
Protein Annotations
| EMBL:ACUP02000103 | EnsemblPlants:KRH74999 | EnsemblPlantsGene:GLYMA_01G056000 | EntrezGene:100802857 | InterPro:Remorin_C | ncoils:Coil |
| PANTHER:PTHR31471 | PANTHER:PTHR31471:SF5 | PFAM:PF03763 | ProteinID:KRH74999 | ProteinID:KRH74999.1 | ProteinID:KRH75000.1 |
| SEG:seg | UniParc:UPI0002337412 | UniProt:A0A0R0LDZ0 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:7231999..7235244
Molecular Weight (calculated)
30449.8 Da
IEP (calculated)
10.258
GRAVY (calculated)
-1.179
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MENFFNQMRD SKIPIQKTQS FKGEKKQGGE NWFQKQFSRK RSGDHDSRDM DHAAAVAAAA FAVNLQDVSE QKSETPEASL TKIKSKVDGT KPPIPLLNSA
101: SKRLSSSFRS KNEQGKKPEE SITPAPSMRK SSTFSDEKPE TSTKPAPVRQ PTVTERHTKA DEWERAEFQE IRQRYDKLRE VIDSWENKKK MKARRKLDKE
201: ERGVAQRRMK ALEDFQNKIT AIDQIADGAR TKAEESRRNE EQKAKEKANA IQTTGEMPGI CFCFCF
101: SKRLSSSFRS KNEQGKKPEE SITPAPSMRK SSTFSDEKPE TSTKPAPVRQ PTVTERHTKA DEWERAEFQE IRQRYDKLRE VIDSWENKKK MKARRKLDKE
201: ERGVAQRRMK ALEDFQNKIT AIDQIADGAR TKAEESRRNE EQKAKEKANA IQTTGEMPGI CFCFCF
001: MKLACKAIIS KTLKKPKPSN TSSQVLPPYF SLKMDTLIKQ TRRKHPASQE KIREVGSSTR EKKVSARKSV SFKEDKKKPS NWLQKQFSRQ MSGQSYDPIG
101: EMDHAAAVAA TAYAIATFEE TWLENYHSGL ELGPSSSRSK SRSEELLPLE EPRSLSRRFS GQLSFIDSET KDHKPPTLKS PMRKSSSVKK TFSMNLMGDH
201: TKQNQDSEEK HERQRKPVSE PPRIQPPLRT RSEPRAPPPP PPPLLSPSPL RLPPRETKRQ SSEHTSRKDD STADAWEKAE LSKIKARYEK LNRKIDLWEA
301: KKREKARRKL DISEQSELEQ RRKRGLQRFR EDTEYIEQIA AGARAQAEKD RQSKEFKVKE KAGVIRSTGK LPGNACCF
101: EMDHAAAVAA TAYAIATFEE TWLENYHSGL ELGPSSSRSK SRSEELLPLE EPRSLSRRFS GQLSFIDSET KDHKPPTLKS PMRKSSSVKK TFSMNLMGDH
201: TKQNQDSEEK HERQRKPVSE PPRIQPPLRT RSEPRAPPPP PPPLLSPSPL RLPPRETKRQ SSEHTSRKDD STADAWEKAE LSKIKARYEK LNRKIDLWEA
301: KKREKARRKL DISEQSELEQ RRKRGLQRFR EDTEYIEQIA AGARAQAEKD RQSKEFKVKE KAGVIRSTGK LPGNACCF
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT1G13920]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.