Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36418 | Canola | nucleus | 86.42 | 86.69 |
| Bra016720.1-P | Field mustard | nucleus | 63.89 | 60.7 |
| Bra004372.1-P | Field mustard | cytosol, mitochondrion, nucleus | 15.43 | 46.73 |
| Bra038312.1-P | Field mustard | nucleus | 13.89 | 42.06 |
| KRH70859 | Soybean | nucleus | 29.63 | 36.09 |
| KRH74999 | Soybean | nucleus | 29.32 | 35.71 |
| KRH50535 | Soybean | nucleus | 33.64 | 32.83 |
| KRG89501 | Soybean | nucleus | 32.41 | 30.88 |
| Zm00001d015411_P001 | Maize | nucleus | 15.43 | 29.07 |
| VIT_01s0011g00820.t01 | Wine grape | nucleus | 31.17 | 26.79 |
| Zm00001d014455_P001 | Maize | nucleus | 27.78 | 25.94 |
| OQU75583 | Sorghum | cytosol | 22.22 | 25.71 |
| KXG39897 | Sorghum | cytosol | 25.31 | 25.71 |
| Zm00001d028185_P002 | Maize | cytosol | 24.69 | 24.77 |
| Solyc04g005470.2.1 | Tomato | nucleus | 24.07 | 24.76 |
| TraesCS4D01G250800.1 | Wheat | nucleus | 23.77 | 24.6 |
| TraesCS1D01G058700.1 | Wheat | nucleus | 26.23 | 24.22 |
| Solyc05g012550.2.1 | Tomato | nucleus | 28.7 | 24.16 |
| TraesCS1A01G057900.1 | Wheat | nucleus | 25.93 | 23.93 |
| TraesCS1B01G075600.1 | Wheat | nucleus | 25.93 | 23.93 |
| TraesCS4A01G053800.2 | Wheat | cytosol | 22.84 | 23.72 |
| HORVU1Hr1G011610.2 | Barley | cytosol | 25.62 | 23.65 |
| TraesCS4B01G250900.1 | Wheat | cytosol | 22.84 | 23.64 |
| GSMUA_Achr2P19260_001 | Banana | nucleus | 21.91 | 23.13 |
| EER90227 | Sorghum | nucleus | 26.23 | 22.73 |
| Os03t0211500-01 | Rice | plasma membrane | 21.6 | 22.44 |
| Zm00001d048109_P002 | Maize | mitochondrion | 24.38 | 22.07 |
| Os10t0325400-01 | Rice | cytosol, nucleus | 24.69 | 20.25 |
| HORVU4Hr1G068900.21 | Barley | cytosol | 19.44 | 19.94 |
| Bra012972.1-P | Field mustard | nucleus | 13.27 | 6.42 |
Protein Annotations
Description
AT1G13920 (E=4e-096) | remorin family protein
Coordinates
chrA06:+:4905430..4906945
Molecular Weight (calculated)
37245.1 Da
IEP (calculated)
10.847
GRAVY (calculated)
-1.332
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLIKQTRR RHPTSQGKTG EVGSSTREKK VPARRSVSFK EDKKKPSSWL QKQFMRQMSD QGYDPISEMD HAAAVAATAY AITTFEETWL ESYHTGLERG
101: ASLSRSKSRR EASPFEEPRS LSRRFSGQLS LKEPELNGDH TRRSGDSREK RERQRKRVSE PPAPMRKQPP TRTRSERHAP PPPPPPPPPP LSPPPLRLPP
201: MEIKTHSSGH TSRKDDATAD DWEKTELAKI KARYEKLNRK IDLWEEKKRD KARRKLDKSE SEQEQKRKRG LQRFREDMEY IEQIAAGARA QAGKQRQTEE
301: LKVKEKAGIV RSTGKIPGKA CFCF
101: ASLSRSKSRR EASPFEEPRS LSRRFSGQLS LKEPELNGDH TRRSGDSREK RERQRKRVSE PPAPMRKQPP TRTRSERHAP PPPPPPPPPP LSPPPLRLPP
201: MEIKTHSSGH TSRKDDATAD DWEKTELAKI KARYEKLNRK IDLWEEKKRD KARRKLDKSE SEQEQKRKRG LQRFREDMEY IEQIAAGARA QAGKQRQTEE
301: LKVKEKAGIV RSTGKIPGKA CFCF
001: MKLACKAIIS KTLKKPKPSN TSSQVLPPYF SLKMDTLIKQ TRRKHPASQE KIREVGSSTR EKKVSARKSV SFKEDKKKPS NWLQKQFSRQ MSGQSYDPIG
101: EMDHAAAVAA TAYAIATFEE TWLENYHSGL ELGPSSSRSK SRSEELLPLE EPRSLSRRFS GQLSFIDSET KDHKPPTLKS PMRKSSSVKK TFSMNLMGDH
201: TKQNQDSEEK HERQRKPVSE PPRIQPPLRT RSEPRAPPPP PPPLLSPSPL RLPPRETKRQ SSEHTSRKDD STADAWEKAE LSKIKARYEK LNRKIDLWEA
301: KKREKARRKL DISEQSELEQ RRKRGLQRFR EDTEYIEQIA AGARAQAEKD RQSKEFKVKE KAGVIRSTGK LPGNACCF
101: EMDHAAAVAA TAYAIATFEE TWLENYHSGL ELGPSSSRSK SRSEELLPLE EPRSLSRRFS GQLSFIDSET KDHKPPTLKS PMRKSSSVKK TFSMNLMGDH
201: TKQNQDSEEK HERQRKPVSE PPRIQPPLRT RSEPRAPPPP PPPLLSPSPL RLPPRETKRQ SSEHTSRKDD STADAWEKAE LSKIKARYEK LNRKIDLWEA
301: KKREKARRKL DISEQSELEQ RRKRGLQRFR EDTEYIEQIA AGARAQAEKD RQSKEFKVKE KAGVIRSTGK LPGNACCF
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT1G13920]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.