Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019698.1-P | Field mustard | nucleus | 86.69 | 86.42 |
| CDX98136 | Canola | nucleus | 81.42 | 81.17 |
| CDX96876 | Canola | nucleus | 61.92 | 58.48 |
| CDY34554 | Canola | nucleus | 58.82 | 55.56 |
| CDX95945 | Canola | cytosol, mitochondrion, nucleus | 13.62 | 41.12 |
| CDY44060 | Canola | nucleus | 13.62 | 41.12 |
| KRH74999 | Soybean | nucleus | 30.65 | 37.22 |
| KRH70859 | Soybean | nucleus | 29.41 | 35.71 |
| KRH50535 | Soybean | nucleus | 33.75 | 32.83 |
| KRG89501 | Soybean | nucleus | 33.75 | 32.06 |
| Zm00001d015411_P001 | Maize | nucleus | 16.1 | 30.23 |
| VIT_01s0011g00820.t01 | Wine grape | nucleus | 30.96 | 26.53 |
| CDY40911 | Canola | endoplasmic reticulum, mitochondrion, plastid | 16.72 | 25.96 |
| OQU75583 | Sorghum | cytosol | 22.29 | 25.71 |
| Zm00001d014455_P001 | Maize | nucleus | 27.55 | 25.65 |
| KXG39897 | Sorghum | cytosol | 25.08 | 25.39 |
| TraesCS1D01G058700.1 | Wheat | nucleus | 26.93 | 24.79 |
| Zm00001d028185_P002 | Maize | cytosol | 24.77 | 24.77 |
| Solyc04g005470.2.1 | Tomato | nucleus | 24.15 | 24.76 |
| TraesCS1B01G075600.1 | Wheat | nucleus | 26.63 | 24.5 |
| TraesCS1A01G057900.1 | Wheat | nucleus | 26.63 | 24.5 |
| HORVU1Hr1G011610.2 | Barley | cytosol | 26.01 | 23.93 |
| Solyc05g012550.2.1 | Tomato | nucleus | 27.86 | 23.38 |
| TraesCS4D01G250800.1 | Wheat | nucleus | 22.6 | 23.32 |
| GSMUA_Achr2P19260_001 | Banana | nucleus | 21.98 | 23.13 |
| Os03t0211500-01 | Rice | plasma membrane | 21.98 | 22.76 |
| TraesCS4A01G053800.2 | Wheat | cytosol | 21.98 | 22.76 |
| TraesCS4B01G250900.1 | Wheat | cytosol | 21.67 | 22.36 |
| EER90227 | Sorghum | nucleus | 25.7 | 22.19 |
| Zm00001d048109_P002 | Maize | mitochondrion | 23.53 | 21.23 |
| Os10t0325400-01 | Rice | cytosol, nucleus | 24.46 | 20.0 |
| HORVU4Hr1G068900.21 | Barley | cytosol | 18.89 | 19.3 |
| CDY23073 | Canola | nucleus | 16.1 | 7.98 |
| CDY02159 | Canola | extracellular, golgi | 13.31 | 5.91 |
Protein Annotations
| EnsemblPlants:CDY36418 | EnsemblPlantsGene:GSBRNA2T00062033001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF5 |
| PFAM:PF03763 | ProteinID:CDY36418 | ProteinID:CDY36418.1 | SEG:seg | UniParc:UPI0004EF2168 | UniProt:A0A078HI07 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC05g10190DBnaC05g10190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HI07]
Coordinates
chrLK032375:+:199896..201401
Molecular Weight (calculated)
37022.9 Da
IEP (calculated)
10.934
GRAVY (calculated)
-1.302
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLIKQTRR RHPTSQGKTV EVGSSTREKK VPARRSVSFK EDKKKPSSWL QKQFMRQMSD QGYDPISEMD HAAAVAATAY AITTFEETWL ESYHTGLERG
101: ASLSRSKSRR ESPFEEPRSL SRRFSGQLSL KEPELNGDHT RRSRDSREKR ERQRKPRVSE PPAPVRKQPS ARTRSERHAP PPPPPPPPLS PPPLRLPPMG
201: VKTQSSGHTS RKDDATADGW EKAELGKIKE SRYEKLNRKI DLWEAKKRDK ARKKLDKSES EQEQRRKRGL QRFRDDMEYI EQIAAGARAQ AEKERQTGEL
301: KVKEKAGIVR STGKIPGKAC FCF
101: ASLSRSKSRR ESPFEEPRSL SRRFSGQLSL KEPELNGDHT RRSRDSREKR ERQRKPRVSE PPAPVRKQPS ARTRSERHAP PPPPPPPPLS PPPLRLPPMG
201: VKTQSSGHTS RKDDATADGW EKAELGKIKE SRYEKLNRKI DLWEAKKRDK ARKKLDKSES EQEQRRKRGL QRFRDDMEYI EQIAAGARAQ AEKERQTGEL
301: KVKEKAGIVR STGKIPGKAC FCF
001: MKLACKAIIS KTLKKPKPSN TSSQVLPPYF SLKMDTLIKQ TRRKHPASQE KIREVGSSTR EKKVSARKSV SFKEDKKKPS NWLQKQFSRQ MSGQSYDPIG
101: EMDHAAAVAA TAYAIATFEE TWLENYHSGL ELGPSSSRSK SRSEELLPLE EPRSLSRRFS GQLSFIDSET KDHKPPTLKS PMRKSSSVKK TFSMNLMGDH
201: TKQNQDSEEK HERQRKPVSE PPRIQPPLRT RSEPRAPPPP PPPLLSPSPL RLPPRETKRQ SSEHTSRKDD STADAWEKAE LSKIKARYEK LNRKIDLWEA
301: KKREKARRKL DISEQSELEQ RRKRGLQRFR EDTEYIEQIA AGARAQAEKD RQSKEFKVKE KAGVIRSTGK LPGNACCF
101: EMDHAAAVAA TAYAIATFEE TWLENYHSGL ELGPSSSRSK SRSEELLPLE EPRSLSRRFS GQLSFIDSET KDHKPPTLKS PMRKSSSVKK TFSMNLMGDH
201: TKQNQDSEEK HERQRKPVSE PPRIQPPLRT RSEPRAPPPP PPPLLSPSPL RLPPRETKRQ SSEHTSRKDD STADAWEKAE LSKIKARYEK LNRKIDLWEA
301: KKREKARRKL DISEQSELEQ RRKRGLQRFR EDTEYIEQIA AGARAQAEKD RQSKEFKVKE KAGVIRSTGK LPGNACCF
Arabidopsis Description
Remorin family protein [Source:TAIR;Acc:AT1G13920]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.