Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61270.1 | KRH39574 | AT1G32230.1 | 19548978 |
| AT5G61270.1 | KRH74370 | AT1G32230.1 | 19548978 |
| AT5G61270.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03090 | Soybean | nucleus | 70.57 | 73.62 |
| KRH54632 | Soybean | nucleus | 31.7 | 32.31 |
| VIT_17s0000g06920.t01 | Wine grape | nucleus | 26.42 | 30.84 |
| Solyc06g069590.2.1 | Tomato | cytosol | 21.13 | 28.57 |
| KRH63271 | Soybean | cytosol | 17.36 | 28.22 |
| AT5G61280.1 | Thale cress | nucleus | 18.87 | 19.01 |
| KRH70859 | Soybean | nucleus | 13.96 | 13.91 |
| KRH50535 | Soybean | nucleus | 15.47 | 12.35 |
| Os03t0211500-01 | Rice | plasma membrane | 13.96 | 11.86 |
| KRG89501 | Soybean | nucleus | 14.72 | 11.47 |
| TraesCS1A01G057900.1 | Wheat | nucleus | 15.09 | 11.4 |
| KRH74999 | Soybean | nucleus | 11.32 | 11.28 |
| TraesCS1D01G058700.1 | Wheat | nucleus | 14.72 | 11.11 |
| KXG39897 | Sorghum | cytosol | 13.21 | 10.97 |
| HORVU1Hr1G011610.2 | Barley | cytosol | 14.34 | 10.83 |
| TraesCS1B01G075600.1 | Wheat | nucleus | 14.34 | 10.83 |
| Zm00001d028185_P002 | Maize | cytosol | 12.83 | 10.53 |
| GSMUA_Achr2P19260_001 | Banana | nucleus | 12.08 | 10.42 |
| Zm00001d014455_P001 | Maize | nucleus | 13.58 | 10.37 |
| TraesCS4B01G250900.1 | Wheat | cytosol | 12.08 | 10.22 |
| Zm00001d048109_P002 | Maize | mitochondrion | 13.58 | 10.06 |
| TraesCS4D01G250800.1 | Wheat | nucleus | 11.7 | 9.9 |
| OQU75583 | Sorghum | cytosol | 10.19 | 9.64 |
| EER90227 | Sorghum | nucleus | 13.21 | 9.36 |
| TraesCS4A01G053800.2 | Wheat | cytosol | 10.94 | 9.29 |
| Os10t0325400-01 | Rice | cytosol, nucleus | 12.08 | 8.1 |
| HORVU4Hr1G068900.21 | Barley | cytosol | 9.43 | 7.91 |
| CDY23073 | Canola | nucleus | 19.25 | 7.82 |
| Bra012972.1-P | Field mustard | nucleus | 17.36 | 6.87 |
| Zm00001d015411_P001 | Maize | nucleus | 4.15 | 6.4 |
| CDY02159 | Canola | extracellular, golgi | 15.85 | 5.77 |
| AT5G61270.1 | Thale cress | nucleus | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02002798 | EnsemblPlants:KRH56866 | EnsemblPlantsGene:GLYMA_05G023400 | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF8 | ProteinID:KRH56866 |
| ProteinID:KRH56866.1 | SEG:seg | UniParc:UPI0006EDC47E | UniProt:A0A0R0JV58 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr5:+:2042726..2044019
Molecular Weight (calculated)
30799.0 Da
IEP (calculated)
11.069
GRAVY (calculated)
-1.047
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MENRLHQRRV SFSDPHSSKH HGSSGSRNDK AWNWLPRITS HDDYVRDDEY IASVAATAFA IHSLEEAELR NLQKMRERSK SSRPQTMRRE ENDIPKRTSY
101: GETSIKRSFG QDPRTKETAF PVRRPSGISP PTSMPVSSAL GYQRQQQGIP LQHKKAKTRP KTWEKAMIKM IQKLLLSSLL AKLFRYEKMK SKILSCEFVK
201: MIQVKVQRAM EMQNYQNKTA REDMRAQGAR AGLENRRRKE SEVRKKSNIN RKTSKDLGKC LCFNS
101: GETSIKRSFG QDPRTKETAF PVRRPSGISP PTSMPVSSAL GYQRQQQGIP LQHKKAKTRP KTWEKAMIKM IQKLLLSSLL AKLFRYEKMK SKILSCEFVK
201: MIQVKVQRAM EMQNYQNKTA REDMRAQGAR AGLENRRRKE SEVRKKSNIN RKTSKDLGKC LCFNS
001: MDNLVKQRRR RVSISENIKT DLPMLSELDI TDYPALNWLK NQSYWYEKND YYNEKESELA VSVAVAAFVI RSMEEADKQK SKRIREEIKR SRTKKSNLVI
101: PNTQVKRLSK SYTQEVKIGE ESFRKKLLEY PSENRRPQEI GSSSGTSGLA SASSKADSWE KSQIKKIRLR YEKMKADIVG WENERKLAAT LLMEKRKVIS
201: LSSE
101: PNTQVKRLSK SYTQEVKIGE ESFRKKLLEY PSENRRPQEI GSSSGTSGLA SASSKADSWE KSQIKKIRLR YEKMKADIVG WENERKLAAT LLMEKRKVIS
201: LSSE
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FLK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.