Factsheet for Bra005336.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31694	Canola	nucleus	83.97	83.33
Bra017317.1-P	Field mustard	nucleus	65.27	64.53
AT2G35510.3	Thale cress	cytosol	56.11	51.76
Bra023252.1-P	Field mustard	nucleus	44.66	48.55
Bra035511.1-P	Field mustard	cytosol	49.05	46.06
VIT_02s0012g01920.t01	Wine grape	cytosol	34.54	33.96
KRH74370	Soybean	mitochondrion, nucleus, plastid	36.83	33.1
KRH39574	Soybean	mitochondrion, nucleus, plastid	36.64	32.93
Solyc08g005270.2.1	Tomato	nucleus	36.83	32.17
PGSC0003DMT400038368	Potato	nucleus	35.69	31.75
VIT_02s0012g01930.t01	Wine grape	nucleus	36.45	30.66
PGSC0003DMT400043197	Potato	nucleus	33.78	29.8
GSMUA_Achr4P19000_001	Banana	nucleus	22.52	28.16
GSMUA_Achr11P...	Banana	nucleus	27.67	27.88
GSMUA_Achr5P14120_001	Banana	nucleus	29.77	27.56
Bra016219.1-P	Field mustard	nucleus	15.84	27.3
GSMUA_Achr2P18060_001	Banana	nucleus	28.82	26.26
TraesCS5D01G551800.3	Wheat	nucleus	28.82	26.12
TraesCS5B01G557500.2	Wheat	nucleus	28.82	26.12
TraesCS4A01G321300.1	Wheat	nucleus	28.24	26.01
GSMUA_Achr8P14660_001	Banana	cytosol, endoplasmic reticulum, nucleus	27.1	25.82
HORVU5Hr1G124010.1	Barley	nucleus	28.24	25.56
Os10t0577800-01	Rice	nucleus	28.44	25.21
KXG38822	Sorghum	nucleus	28.63	25.21
TraesCS1B01G210300.4	Wheat	peroxisome	28.05	24.96
TraesCS1A01G195400.4	Wheat	cytosol	28.05	24.83
Bra029254.1-P	Field mustard	cytosol	14.31	24.75
Zm00001d030110_P001	Maize	mitochondrion, nucleus	28.05	24.66
TraesCS1D01G199200.1	Wheat	cytosol, nucleus, plastid	27.86	24.66
EER90487	Sorghum	nucleus	26.72	24.43
Bra012380.1-P	Field mustard	cytosol	14.31	24.19
Zm00001d014423_P002	Maize	nucleus	28.24	24.14
Os03t0854800-03	Rice	nucleus	26.53	23.8
HORVU1Hr1G050960.7	Barley	nucleus	27.48	23.65
KRH74373	Soybean	mitochondrion	21.37	23.48
Bra010096.1-P	Field mustard	nucleus	13.93	23.32
Bra024609.1-P	Field mustard	cytoskeleton, cytosol, nucleus	13.55	23.05
HORVU0Hr1G014460.1	Barley	nucleus	24.05	21.84
Zm00001d012821_P003	Maize	extracellular, vacuole	25.95	20.73

Protein Annotations

Gene3D:3.90.228.10	MapMan:35.1	EnsemblPlantsGene:Bra005336	EnsemblPlants:Bra005336.1	EnsemblPlants:Bra005336.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0003950	GO:GO:0016740	InterPro:IPR004170	InterPro:IPR012317
UniProt:M4CM98	PFAM:PF12174	PFscan:PS50918	PFscan:PS51059	PANTHER:PTHR32263	PANTHER:PTHR32263:SF4
InterPro:Poly(ADP-ribose)pol_cat_dom	InterPro:RST	SUPFAM:SSF56399	UniParc:UPI0002547E43	InterPro:WWE-dom	SEG:seg

Description

AT2G35510 (E=4e-111) SRO1 | SRO1 (SIMILAR TO RCD ONE 1); NAD+ ADP-ribosyltransferase

Coordinates

chrA05:+:4905877..4908322

Molecular Weight (calculated)

58580.8 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.378

Length

524 amino acids

Sequence
(BLAST)

001: MESNFVKVLD SSFKDGPGKK RKHPDYYDSG RSFAKLQCVL SPTEKLNSGN KVNASENPSG KSLVRYYSYF KKTGVPKRVM FYENGEWTDL PDHVICSIKN
101: DLEAKRAVIE VNWSGRCFVL DFLHMHRLDL ETGVRTHLAW IDIAGKCFFP EVYERDCEED QCEIKLHLEV DVNGVVQPSL DESSEDSCSS IGTNMFSGLK
201: PADEEEVDVE AVKEKFVLGM ATLGDVELLN AYRFSGDITK ARQSLFNKQA DITKSRRGDA NIRYAWVPVK KKLLSSVMKH GLGVGGEFIK KSKYGVGVHL
301: TAANCPYFSA THCDIDENGV RHMVLCRVIM GNMEPLCGDR AQFFTGGEEY DNGVDNVLSP KHYLVWNMNV NTHVYPEFVV SFKLLSIPNA EGGLLSENSR
401: LTLEGAKGSV SNGTGRVTNG DKSAGSALMP YPLLFNAISS KVAQEEMDLI TSDYQQLREK KISREEFSRK LRVIVGDDDL LRTTITSLQR LPSMKMKPVP
501: VSPEPSSWHA WGLPALELNN HDCV

Best Arabidopsis Sequence Match ( AT2G35510.3 )
(BLAST)

001: MEAKIVKVSD SSYKDGLGKK RKHPGNYTPY DSGRSYAKLQ WVLSPNSSTQ KLEKRRNLDG ENKVIVSENH VEKSLVRYFS YYKKTGVPKR VMFHENGEWI
101: DLPDHILCDI RNDLEAKRAT IEFNWCGRHF LLDFLHMYRL DLETGVKTQL AWIDIAGKCF FPETFDTLER DGCHHIRGED PEQHDQREIK LHIEIDVNSG
201: ELPRLNLNVV TDESGDNMDD FQAVQRSSNG PNDEASEDSC SRELDDAVEK WDKTETDRFS GVKPAEEELD KDAVKQMFAL GAATLGHVES LDVYQFSSEI
301: AKARLSLFQK QADITKKHRG DANIRYAWVP AKKEVLSAVM MHGLGVGGAF IKKSMYGVGV HAANCPYFSA RYCDIDDNGV RHMVLCRVIM GNMEPLRGDN
401: TQYFTGGEEY DNGVDDVESP KHYLIWNMNM NTHIYPEFVV SFKLSIPNAE GNILPTTQSR HESSGLTLEG PKGSPSNEPG RVSNGGSGSE KNSSSSRRPR
501: SPIMPFPLLF KAISSKIARK DMDLIIAGYQ ELREKKVSRK EFYKTLSMIV GDDDLLISTI TGLQRSLG

Arabidopsis Description

SRO1Probable inactive poly [ADP-ribose] polymerase SRO1 [Source:UniProtKB/Swiss-Prot;Acc:O82289]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.