Factsheet for Bra029254.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra038128.1-P
Bra039676.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62520.1	Bra038128.1-P	AT1G53510.1	21798944
AT5G62520.1	Bra039676.1-P	AT1G53510.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70596	Canola	cytosol	94.06	94.06
Bra010096.1-P	Field mustard	nucleus	75.25	72.84
AT5G62520.1	Thale cress	nucleus	73.27	71.84
VIT_17s0000g08370.t01	Wine grape	nucleus	39.93	35.17
KRH57070	Soybean	cytosol	37.62	34.86
KRH03292	Soybean	cytosol	38.61	34.82
GSMUA_Achr5P03800_001	Banana	cytosol	19.14	34.12
Bra024609.1-P	Field mustard	cytoskeleton, cytosol, nucleus	33.66	33.12
KRH63531	Soybean	nucleus	35.64	32.73
Bra012380.1-P	Field mustard	cytosol	33.0	32.26
PGSC0003DMT400063250	Potato	nucleus	38.94	31.38
Solyc03g114360.2.1	Tomato	nucleus	38.28	30.93
Bra016219.1-P	Field mustard	nucleus	30.69	30.59
GSMUA_Achr4P27510_001	Banana	cytosol	26.4	27.78
Bra017317.1-P	Field mustard	nucleus	25.08	14.34
Bra005336.1-P	Field mustard	cytosol, nucleus, plastid	24.75	14.31
Bra035511.1-P	Field mustard	cytosol	25.41	13.8
Bra023252.1-P	Field mustard	nucleus	21.45	13.49

Protein Annotations

EnsemblPlants:Bra029254.1	EnsemblPlants:Bra029254.1-P	EnsemblPlantsGene:Bra029254	Gene3D:3.90.228.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0003950	GO:GO:0016740	InterPro:IPR012317	InterPro:Poly(ADP-ribose)pol_cat_dom	InterPro:RST	PANTHER:PTHR32263
PANTHER:PTHR32263:SF6	PFAM:PF12174	PFscan:PS51059	SUPFAM:SSF56399	UniParc:UPI0002545DA1	UniProt:M4EKD7
MapMan:35.1	:	:	:	:	:

Description

AT5G62520 (E=1e-136) SRO5 | SRO5 (SIMILAR TO RCD ONE 5); NAD+ ADP-ribosyltransferase

Coordinates

chrA02:+:26296663..26297969

Molecular Weight (calculated)

34152.0 Da

IEP (calculated)

8.548

GRAVY (calculated)

-0.381

Length

303 amino acids

Sequence
(BLAST)

001: MDYSEQEERS TISESGSSNS YDQQRPSFAD EHGLMELLEG DRAYDLIYRN CKSALGDQCE LLSILRNGFA AVGSRAKLKA FQVFQEAVEM KHAGEEGGGK
101: ARVKYGWCAV KKTELKSVLE YGFSQPRNDG CYGRGLYLSP DNALLECLKD SAAESEDGMR FLLLCRVILG KSEVVPRGST QSCPSSPEFE SGVDDLASPS
201: KYIVWSTHMN THVLPEFLVC IKAPFNFNRS VKRLRSPWMA FPVLIKALSK FLPPTQILII QKHYKDQQSR RISRSELIQR VRHITGDKLL VHIIKAFGHK
301: VQH

Best Arabidopsis Sequence Match ( AT5G62520.1 )
(BLAST)

001: MDYVRTQVEA VFDDSEQDGS TISESGSCDS SSDRSFADEL GLMELLEGDK AHDLIYRNCK SGLGDQCQIL SVLRNGFRNV GSRAKLKTFQ VFQEAVQMKH
101: GGDGGAKVKY GWCSVSKHEL KTIFEYGFSE PLRNDGSFGR GLYLSPDNSP LDCLKDSASE SEDGMRFLLL CRVLLGKSEI VPQGSTRSCP SSPEFDSGVD
201: DLVSTKKYIV WSTHMNTHVL PEFLVCIKAP FNLTRSPKRL RSPWMAFPVL IKALSKFLPP SQILVIQKHY KDQQNRRITR SELIQRVRSI TGDKLLVHII
301: KACGHKVQH

Arabidopsis Description

SRO5Probable inactive poly [ADP-ribose] polymerase SRO5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.