Factsheet for Bra016219.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytoskeleton, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57852	Canola	nucleus	93.42	91.61
AT1G70440.1	Thale cress	cytoskeleton, cytosol, nucleus	56.25	56.07
Bra012380.1-P	Field mustard	cytosol	55.59	54.52
Bra024609.1-P	Field mustard	cytoskeleton, cytosol, nucleus	51.97	51.3
PGSC0003DMT400035039	Potato	cytosol	34.21	34.67
KRH42972	Soybean	cytosol	31.91	34.15
VIT_01s0127g00680.t01	Wine grape	nucleus	36.51	34.15
Solyc05g005290.2.1	Tomato	cytosol	25.99	33.91
GSMUA_Achr5P03800_001	Banana	cytosol	18.75	33.53
Solyc05g005280.2.1	Tomato	cytosol	32.24	32.24
Bra010096.1-P	Field mustard	nucleus	31.91	30.99
Bra029254.1-P	Field mustard	cytosol	30.59	30.69
PGSC0003DMT400035056	Potato	cytosol	32.57	29.82
GSMUA_Achr4P27510_001	Banana	cytosol	27.3	28.82
Bra023252.1-P	Field mustard	nucleus	25.66	16.18
Bra017317.1-P	Field mustard	nucleus	27.63	15.85
Bra005336.1-P	Field mustard	cytosol, nucleus, plastid	27.3	15.84
Bra035511.1-P	Field mustard	cytosol	27.63	15.05

Protein Annotations

EnsemblPlants:Bra016219.1	EnsemblPlants:Bra016219.1-P	EnsemblPlantsGene:Bra016219	Gene3D:3.90.228.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0003950	GO:GO:0016740	InterPro:IPR012317	InterPro:Poly(ADP-ribose)pol_cat_dom	InterPro:RST	PANTHER:PTHR32263
PANTHER:PTHR32263:SF8	PFAM:PF12174	PFscan:PS51059	SEG:seg	SUPFAM:SSF56399	UniParc:UPI0002541993
UniProt:M4DI92	MapMan:35.1	:	:	:	:

Description

AT1G70440 (E=5e-104) SRO3 | SRO3 (SIMILAR TO RCD ONE 3); NAD+ ADP-ribosyltransferase

Coordinates

chrA07:-:18821147..18822313

Molecular Weight (calculated)

33791.4 Da

IEP (calculated)

8.144

GRAVY (calculated)

-0.318

Length

304 amino acids

Sequence
(BLAST)

001: MAAQVEIVDN GEIIDTLSHH ASGDYSSTIL LREENHEYDV VKNCFLSGMS LHAAETTVVS VRKTSAQRIT AKAKLAASNV FAEAMKRKNG GDANVRYGWY
101: SGSKEEIERI VSYGFSSSEV EKFEKDDRSH GVGVHFLHHT CSKAAAVLGE ADEEGIEHLL LCRLILGKPE RIIAGSKQTY PSSSEYDCGV DDLENPRKYV
201: IWSCNMNSYI LPSHVVSFKS PTLRGLIRGG GGGLGRARSP CVSFPILMSI LSKSLDRPRM NVILTTYVDF RKGKVRREQL IRKMREVVGD ELLLDIIKNH
301: RNSD

Best Arabidopsis Sequence Match ( AT1G70440.1 )
(BLAST)

001: MAAQVEIEDQ ESVTNLDNGE IINPISDNAP NFSGDATILL REATFEHNLI KNCFLSGMGS FATETTIVTV RKILTQRLIT TKAKFAVFKL FTEAMKRKNN
101: GYANIRYGWY SGSKEEIDRV ITYGFSNREI KKVENDVGSH GVGIHLVHHR YSLAAALVGE GDEEGIKNIL LCRVILGKPE QIVTGSKQSY PSSNQFDSGV
201: DNLENPRKYV IWSCNMNSYI LPTYIVSFKS HLLRGLIGRA RSPCVSFSVL MSILSKSLDA ARMNLILTSY DDFRKRKLRR EQLVRKIREV VGDNLLFKIL
301: KNQRR

Arabidopsis Description

SRO3Probable inactive poly [ADP-ribose] polymerase SRO3 [Source:UniProtKB/Swiss-Prot;Acc:O64592]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.