Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11593 | Canola | nucleus | 59.02 | 59.02 |
| AT1G23550.1 | Thale cress | nucleus | 61.31 | 57.89 |
| Bra016219.1-P | Field mustard | nucleus | 56.07 | 56.25 |
| CDY57852 | Canola | nucleus | 56.07 | 55.16 |
| KRH42972 | Soybean | cytosol | 32.13 | 34.51 |
| GSMUA_Achr5P03800_001 | Banana | cytosol | 19.02 | 34.12 |
| Solyc05g005290.2.1 | Tomato | cytosol | 25.9 | 33.91 |
| Solyc05g005280.2.1 | Tomato | cytosol | 33.77 | 33.88 |
| PGSC0003DMT400035039 | Potato | cytosol | 33.11 | 33.67 |
| VIT_01s0127g00680.t01 | Wine grape | nucleus | 34.1 | 32.0 |
| AT5G62520.1 | Thale cress | nucleus | 31.48 | 31.07 |
| GSMUA_Achr4P27510_001 | Banana | cytosol | 28.2 | 29.86 |
| PGSC0003DMT400035056 | Potato | cytosol | 32.46 | 29.82 |
| AT3G47720.1 | Thale cress | nucleus | 28.52 | 27.53 |
| AT1G32230.1 | Thale cress | nucleus | 25.57 | 13.24 |
| AT2G35510.3 | Thale cress | cytosol | 24.59 | 13.2 |
Protein Annotations
| Gene3D:3.90.228.10 | MapMan:35.1 | EntrezGene:843380 | ProteinID:AAC18815.1 | ProteinID:AAG52467.1 | ProteinID:AEE35062.1 |
| ProteinID:ANM59109.1 | ArrayExpress:AT1G70440 | EnsemblPlantsGene:AT1G70440 | RefSeq:AT1G70440 | TAIR:AT1G70440 | RefSeq:AT1G70440-TAIR-G |
| EnsemblPlants:AT1G70440.1 | TAIR:AT1G70440.1 | Unigene:At.70661 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003950 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0016740 | InterPro:IPR012317 | RefSeq:NP_001321500.1 | RefSeq:NP_177201.1 | UniProt:O64592 | PFAM:PF12174 |
| PFscan:PS51059 | PANTHER:PTHR32263 | PANTHER:PTHR32263:SF8 | InterPro:Poly(ADP-ribose)pol_cat_dom | InterPro:RST | Symbol:SRO3 |
| SUPFAM:SSF56399 | UniParc:UPI000016327E | : | : | : | : |
Description
SRO3Probable inactive poly [ADP-ribose] polymerase SRO3 [Source:UniProtKB/Swiss-Prot;Acc:O64592]
Coordinates
chr1:-:26548952..26550636
Molecular Weight (calculated)
34502.7 Da
IEP (calculated)
9.894
GRAVY (calculated)
-0.252
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQVEIEDQ ESVTNLDNGE IINPISDNAP NFSGDATILL REATFEHNLI KNCFLSGMGS FATETTIVTV RKILTQRLIT TKAKFAVFKL FTEAMKRKNN
101: GYANIRYGWY SGSKEEIDRV ITYGFSNREI KKVENDVGSH GVGIHLVHHR YSLAAALVGE GDEEGIKNIL LCRVILGKPE QIVTGSKQSY PSSNQFDSGV
201: DNLENPRKYV IWSCNMNSYI LPTYIVSFKS HLLRGLIGRA RSPCVSFSVL MSILSKSLDA ARMNLILTSY DDFRKRKLRR EQLVRKIREV VGDNLLFKIL
301: KNQRR
101: GYANIRYGWY SGSKEEIDRV ITYGFSNREI KKVENDVGSH GVGIHLVHHR YSLAAALVGE GDEEGIKNIL LCRVILGKPE QIVTGSKQSY PSSNQFDSGV
201: DNLENPRKYV IWSCNMNSYI LPTYIVSFKS HLLRGLIGRA RSPCVSFSVL MSILSKSLDA ARMNLILTSY DDFRKRKLRR EQLVRKIREV VGDNLLFKIL
301: KNQRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.