CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0127g00680.t01	Wine grape	nucleus	41.2	36.0
Solyc05g005290.2.1	Tomato	cytosol	28.87	35.19
Solyc05g005280.2.1	Tomato	cytosol	36.97	34.54
PGSC0003DMT400035039	Potato	cytosol	34.86	33.0
CDY54287	Canola	nucleus	35.56	32.9
CDY51640	Canola	cytoskeleton, cytosol, nucleus	35.21	32.89
AT1G23550.1	Thale cress	nucleus	36.97	32.51
AT1G70440.1	Thale cress	cytoskeleton, cytosol, nucleus	34.51	32.13
CDY11593	Canola	nucleus	34.51	32.13
Bra016219.1-P	Field mustard	nucleus	34.15	31.91
CDY25790	Canola	cytoskeleton, cytosol, nucleus	34.86	31.83
GSMUA_Achr5P03800_001	Banana	cytosol	19.01	31.76
Bra012380.1-P	Field mustard	cytosol	34.51	31.61
CDY44157	Canola	cytoskeleton, cytosol, nucleus	34.15	31.49
Bra024609.1-P	Field mustard	cytoskeleton, cytosol, nucleus	34.15	31.49
CDY57852	Canola	nucleus	33.45	30.65
GSMUA_Achr4P27510_001	Banana	cytosol	29.23	28.82
KRH03292	Soybean	cytosol	33.45	28.27
KRH57070	Soybean	cytosol	32.39	28.13
PGSC0003DMT400035056	Potato	cytosol	32.75	28.01
KRH63531	Soybean	nucleus	30.63	26.36
KRH74370	Soybean	mitochondrion, nucleus, plastid	32.04	15.61
KRH39574	Soybean	mitochondrion, nucleus, plastid	30.99	15.09
KRH74373	Soybean	mitochondrion	15.49	9.22

Protein Annotations

EntrezGene:100804972	Gene3D:3.90.228.10	MapMan:35.1	EMBL:ACUP02004841	EnsemblPlantsGene:GLYMA_08G123000	GO:GO:0003674
GO:GO:0003824	GO:GO:0003950	GO:GO:0016740	GO:GO:0016757	InterPro:IPR012317	UniProt:K7L681
EnsemblPlants:KRH42972	ProteinID:KRH42972	ProteinID:KRH42972.1	PFAM:PF00644	PFAM:PF12174	PFscan:PS51059
PANTHER:PTHR32263	PANTHER:PTHR32263:SF8	InterPro:Poly(ADP-ribose)pol_cat_dom	InterPro:RST	SUPFAM:SSF56399	UniParc:UPI0002960B3F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:9464362..9466271

Molecular Weight (calculated)

31932.3 Da

IEP (calculated)

7.657

GRAVY (calculated)

-0.276

Length

284 amino acids

Sequence
(BLAST)

001: MQQPIENSVG KGLMKVEEES EEYESIKNVF LKGMGFVGHA TDAMAIYKNM LSFSVARQAR WVSFKIFSKA VAIKSGGDAN IGYAWYGSSL DDLLEIVSGG
101: FHGCKKHDDN DDDECHGIGI PLFAANFSLD SAMCTVADEH GFRHVLLCKV ILGKVEAVHA GSKQSQPSSK QYDTGVDDIS APRRHTIWTA YLNTHIHPNY
201: IICFKYNNYI KDPEMHGALK PQSPYVSFPN LLARVSNHLK PAQMSMLLKD YRIYKEQKIS REQWVNKVRL IVGDELLRLV ITTQ

Best Arabidopsis Sequence Match ( AT1G23550.1 )
(BLAST)

001: MAAQVEIEDQ TSVTNLDNGE IFDSISDDAD SSVSHAGSSF SSSSLILLGE GNPEHDVIKT CLLSGMGVVS SDTTIVTISK NSSERGITTR AKFLAFRIFT
101: DAVARKHGGD ANVKYGWYAG SRDEIQRIIS YGFSNRDVGK FENDGGSHGI GIHLVPSKCS LLAASATEQD EEGLRYLLLC RVILGKPEII ISGSKQSYPS
201: SAEFDSGVDD LHNPRNYVIW SCNMNSCILP SYIVSFRSPR LRVSRGGFAS RPSSPWVSFA SLMSMLSTSM DPSRMNLIIR TYDDFRKRKI RRDQLVRKMR
301: EVAGDNLLAE IIKNHKNRNK VTN

Arabidopsis Description

SRO2Probable inactive poly [ADP-ribose] polymerase SRO2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUD9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.