Factsheet for Bra024609.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44157	Canola	cytoskeleton, cytosol, nucleus	99.35	99.35
Bra012380.1-P	Field mustard	cytosol	57.79	57.42
AT1G23550.1	Thale cress	nucleus	58.77	56.04
Bra016219.1-P	Field mustard	nucleus	51.3	51.97
Solyc05g005280.2.1	Tomato	cytosol	37.01	37.5
VIT_01s0127g00680.t01	Wine grape	nucleus	39.29	37.23
PGSC0003DMT400035039	Potato	cytosol	36.04	37.0
GSMUA_Achr5P03800_001	Banana	cytosol	19.48	35.29
Solyc05g005290.2.1	Tomato	cytosol	25.97	34.33
KRH42972	Soybean	cytosol	31.49	34.15
Bra029254.1-P	Field mustard	cytosol	33.12	33.66
Bra010096.1-P	Field mustard	nucleus	33.44	32.91
PGSC0003DMT400035056	Potato	cytosol	34.42	31.93
GSMUA_Achr4P27510_001	Banana	cytosol	28.25	30.21
Bra023252.1-P	Field mustard	nucleus	25.0	15.98
Bra035511.1-P	Field mustard	cytosol	25.97	14.34
Bra005336.1-P	Field mustard	cytosol, nucleus, plastid	23.05	13.55
Bra017317.1-P	Field mustard	nucleus	23.05	13.4

Protein Annotations

EnsemblPlants:Bra024609.1	EnsemblPlants:Bra024609.1-P	EnsemblPlantsGene:Bra024609	Gene3D:3.90.228.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0003950	GO:GO:0016740	InterPro:IPR012317	InterPro:Poly(ADP-ribose)pol_cat_dom	InterPro:RST	PANTHER:PTHR32263
PANTHER:PTHR32263:SF8	PFAM:PF12174	PFscan:PS51059	SEG:seg	SUPFAM:SSF56399	UniParc:UPI000254297E
UniProt:M4E754	MapMan:35.1	:	:	:	:

Description

AT1G23550 (E=2e-104) SRO2 | SRO2 (SIMILAR TO RCD ONE 2); NAD+ ADP-ribosyltransferase

Coordinates

chrA09:-:24077869..24079029

Molecular Weight (calculated)

33420.6 Da

IEP (calculated)

6.631

GRAVY (calculated)

-0.217

Length

308 amino acids

Sequence
(BLAST)

001: MAAAHVEIED QSSVSTELDN GEILEPLSDA DSSSASSGSA ILLGQGNQEH DVIKACFLSG LGAAFAVDTT VESVRKTSTE GVAARARYVA FRIFTEAMAR
101: KNGGDPNVKY GWFAGSREEI DRIVSYGFSS REIDDGSHGI GVHLVPSKCS LFAAVGAEPD GEGVRHLLLC RVLLGRPEQI DAGSTQSHPS SGEFDCAVDD
201: LQEPRKYIVW SSNMNSYILP SYIVSFKSPR LRVIGRGGPP PSSPWVSFTA VVSVLSKFLD ASRMSLIKKT FDDFRKGKIP RDQLVRKMRQ VAGDDLLAQI
301: IKNHKDRV

Best Arabidopsis Sequence Match ( AT1G23550.1 )
(BLAST)

001: MAAQVEIEDQ TSVTNLDNGE IFDSISDDAD SSVSHAGSSF SSSSLILLGE GNPEHDVIKT CLLSGMGVVS SDTTIVTISK NSSERGITTR AKFLAFRIFT
101: DAVARKHGGD ANVKYGWYAG SRDEIQRIIS YGFSNRDVGK FENDGGSHGI GIHLVPSKCS LLAASATEQD EEGLRYLLLC RVILGKPEII ISGSKQSYPS
201: SAEFDSGVDD LHNPRNYVIW SCNMNSCILP SYIVSFRSPR LRVSRGGFAS RPSSPWVSFA SLMSMLSTSM DPSRMNLIIR TYDDFRKRKI RRDQLVRKMR
301: EVAGDNLLAE IIKNHKNRNK VTN

Arabidopsis Description

SRO2Probable inactive poly [ADP-ribose] polymerase SRO2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUD9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.