Factsheet for Bra017317.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32124	Canola	nucleus	96.04	96.04
Bra005336.1-P	Field mustard	cytosol, nucleus, plastid	64.53	65.27
AT2G35510.3	Thale cress	cytosol	57.92	54.05
Bra023252.1-P	Field mustard	nucleus	43.02	47.3
Bra035511.1-P	Field mustard	cytosol	48.49	46.06
KRH74370	Soybean	mitochondrion, nucleus, plastid	39.81	36.19
VIT_02s0012g01920.t01	Wine grape	cytosol	36.23	36.02
KRH39574	Soybean	mitochondrion, nucleus, plastid	39.43	35.85
Solyc08g005270.2.1	Tomato	nucleus	38.11	33.67
PGSC0003DMT400038368	Potato	nucleus	36.23	32.6
VIT_02s0012g01930.t01	Wine grape	nucleus	38.3	32.58
GSMUA_Achr5P14120_001	Banana	nucleus	32.26	30.21
GSMUA_Achr11P...	Banana	nucleus	29.06	29.62
PGSC0003DMT400043197	Potato	nucleus	32.83	29.29
GSMUA_Achr4P19000_001	Banana	nucleus	22.64	28.64
Bra016219.1-P	Field mustard	nucleus	15.85	27.63
GSMUA_Achr8P14660_001	Banana	cytosol, endoplasmic reticulum, nucleus	28.11	27.09
GSMUA_Achr2P18060_001	Banana	nucleus	29.25	26.96
TraesCS4A01G321300.1	Wheat	nucleus	28.68	26.71
TraesCS5D01G551800.3	Wheat	nucleus	29.06	26.64
TraesCS5B01G557500.2	Wheat	nucleus	29.06	26.64
KRH74373	Soybean	mitochondrion	23.77	26.42
HORVU5Hr1G124010.1	Barley	nucleus	28.68	26.25
Os03t0854800-03	Rice	nucleus	28.68	26.03
Os10t0577800-01	Rice	nucleus	28.87	25.89
TraesCS1B01G210300.4	Wheat	peroxisome	28.3	25.47
TraesCS1D01G199200.1	Wheat	cytosol, nucleus, plastid	28.3	25.34
TraesCS1A01G195400.4	Wheat	cytosol	28.11	25.17
Bra029254.1-P	Field mustard	cytosol	14.34	25.08
KXG38822	Sorghum	nucleus	28.11	25.04
Bra012380.1-P	Field mustard	cytosol	14.53	24.84
EER90487	Sorghum	nucleus	26.79	24.78
Bra010096.1-P	Field mustard	nucleus	14.53	24.6
Zm00001d030110_P001	Maize	mitochondrion, nucleus	27.55	24.5
Zm00001d014423_P002	Maize	nucleus	28.11	24.31
HORVU1Hr1G050960.7	Barley	nucleus	27.92	24.3
Bra024609.1-P	Field mustard	cytoskeleton, cytosol, nucleus	13.4	23.05
HORVU0Hr1G014460.1	Barley	nucleus	23.96	22.01
Zm00001d012821_P003	Maize	extracellular, vacuole	25.85	20.88

Protein Annotations

EnsemblPlants:Bra017317.1	EnsemblPlants:Bra017317.1-P	EnsemblPlantsGene:Bra017317	Gene3D:3.90.228.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0003950	GO:GO:0016740	InterPro:IPR004170	InterPro:IPR012317	InterPro:Poly(ADP-ribose)pol_cat_dom	InterPro:RST
InterPro:WWE-dom	PANTHER:PTHR32263	PANTHER:PTHR32263:SF4	PFAM:PF12174	PFscan:PS50918	PFscan:PS51059
SUPFAM:SSF56399	UniParc:UPI0002543C7D	UniProt:M4DLD6	MapMan:35.1	:	:

Description

AT2G35510 (E=8e-126) SRO1 | SRO1 (SIMILAR TO RCD ONE 1); NAD+ ADP-ribosyltransferase

Coordinates

chrA04:-:15393395..15395430

Molecular Weight (calculated)

58640.9 Da

IEP (calculated)

7.401

GRAVY (calculated)

-0.409

Length

530 amino acids

Sequence
(BLAST)

001: MESNIVKVSD SSFNDKLGKK RKHSAYYTSY DSGKSTAKLQ CVLSPNGSTG KLDKSRNEVN VSDNHSGKSL VRYYSYFKKT GVPKRVMLYE NGEWTDLPEN
101: VICSVRNDLE AKRAAIEVNC SGQHFVLDFL HMHRLDLETG VKTHLAWIDI AGKCFFPDSV GGEDLEQHGQ CEIKLHLEID INGGKSPKLK LNSTDSCSLE
201: LDDDDVQRWD DETEASMFSG VKPAEEEDLD VDAVREKFVL GMAALGQVEL LDAYRFSGGV AKDRQSLFKK QADITKLSRG DANIRYAWLP AKKELLSAVM
301: MHGLGVCGDL IKKSKYGVGV HLAAANCPYF SATHCDVDEN GVRHMVLCRV IMGNMEPLGG DRGQFVTGGE GYDNGVDNIS SPKHYVVWNM NMNTHVYPEF
401: VVSFKLLSIT NAEGNLLSAG QSKHESSGLT LEGAKGSLSN SAGSRTRRPS SNLMPYPLLF KAISSKIAQK DMDLITAYYQ QLREKKISRE GFSRKLRMIV
501: GDDHLLKTTI TALQRLPHTA VKMEPITGGC

Best Arabidopsis Sequence Match ( AT2G35510.3 )
(BLAST)

001: MEAKIVKVSD SSYKDGLGKK RKHPGNYTPY DSGRSYAKLQ WVLSPNSSTQ KLEKRRNLDG ENKVIVSENH VEKSLVRYFS YYKKTGVPKR VMFHENGEWI
101: DLPDHILCDI RNDLEAKRAT IEFNWCGRHF LLDFLHMYRL DLETGVKTQL AWIDIAGKCF FPETFDTLER DGCHHIRGED PEQHDQREIK LHIEIDVNSG
201: ELPRLNLNVV TDESGDNMDD FQAVQRSSNG PNDEASEDSC SRELDDAVEK WDKTETDRFS GVKPAEEELD KDAVKQMFAL GAATLGHVES LDVYQFSSEI
301: AKARLSLFQK QADITKKHRG DANIRYAWVP AKKEVLSAVM MHGLGVGGAF IKKSMYGVGV HAANCPYFSA RYCDIDDNGV RHMVLCRVIM GNMEPLRGDN
401: TQYFTGGEEY DNGVDDVESP KHYLIWNMNM NTHIYPEFVV SFKLSIPNAE GNILPTTQSR HESSGLTLEG PKGSPSNEPG RVSNGGSGSE KNSSSSRRPR
501: SPIMPFPLLF KAISSKIARK DMDLIIAGYQ ELREKKVSRK EFYKTLSMIV GDDDLLISTI TGLQRSLG

Arabidopsis Description

SRO1Probable inactive poly [ADP-ribose] polymerase SRO1 [Source:UniProtKB/Swiss-Prot;Acc:O82289]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.