Factsheet for Bra012380.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25790	Canola	cytoskeleton, cytosol, nucleus	94.84	94.53
AT1G23550.1	Thale cress	nucleus	63.55	60.99
Bra024609.1-P	Field mustard	cytoskeleton, cytosol, nucleus	57.42	57.79
Bra016219.1-P	Field mustard	nucleus	54.52	55.59
PGSC0003DMT400035039	Potato	cytosol	34.19	35.33
GSMUA_Achr5P03800_001	Banana	cytosol	19.35	35.29
Solyc05g005280.2.1	Tomato	cytosol	34.52	35.2
KRH42972	Soybean	cytosol	31.61	34.51
VIT_01s0127g00680.t01	Wine grape	nucleus	36.13	34.46
Solyc05g005290.2.1	Tomato	cytosol	25.16	33.48
Bra029254.1-P	Field mustard	cytosol	32.26	33.0
Bra010096.1-P	Field mustard	nucleus	33.23	32.91
PGSC0003DMT400035056	Potato	cytosol	32.9	30.72
GSMUA_Achr4P27510_001	Banana	cytosol	27.42	29.51
Bra023252.1-P	Field mustard	nucleus	23.87	15.35
Bra017317.1-P	Field mustard	nucleus	24.84	14.53
Bra005336.1-P	Field mustard	cytosol, nucleus, plastid	24.19	14.31
Bra035511.1-P	Field mustard	cytosol	24.84	13.8

Protein Annotations

EnsemblPlants:Bra012380.1	EnsemblPlants:Bra012380.1-P	EnsemblPlantsGene:Bra012380	Gene3D:3.90.228.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0003950	GO:GO:0016740	InterPro:IPR012317	InterPro:Poly(ADP-ribose)pol_cat_dom	InterPro:RST	PANTHER:PTHR32263
PANTHER:PTHR32263:SF8	PFAM:PF12174	PFscan:PS51059	SEG:seg	SUPFAM:SSF56399	UniParc:UPI00025413A8
UniProt:M4D7C0	MapMan:35.1	:	:	:	:

Description

AT1G23550 (E=3e-099) SRO2 | SRO2 (SIMILAR TO RCD ONE 2); NAD+ ADP-ribosyltransferase

Coordinates

chrA07:-:8098261..8099752

Molecular Weight (calculated)

34577.1 Da

IEP (calculated)

9.022

GRAVY (calculated)

-0.361

Length

310 amino acids

Sequence
(BLAST)

001: MAAQVEIELD NGEILDPLSS SSSSATDSTI LLREGNQEHD VITTCFLSGL GATLANATTI VTIRKKSPNA ITTRAKSLAF RIFTEAMARK NNGDPNVKYG
101: WYAGSREDLE RIVTYGFSSR EIDDDSSSNG IGIHLVPSKF SLFAAEATEE DEEGLRHLLL CRLILGKPEE IGSGSKQAYP SSVEFDSGVD DVQNPRKYVV
201: WSSTMNSYIL PTYIVAFKSP RLTVIRNGGS PARLSSPRVS FAALMLSLSK SMDTFRMNLI IRTYDDFRKR KIQRDQLVRK MREVAGDNLL AQIIRNHRDK
301: NKRKFYTCDA

Best Arabidopsis Sequence Match ( AT1G23550.1 )
(BLAST)

001: MAAQVEIEDQ TSVTNLDNGE IFDSISDDAD SSVSHAGSSF SSSSLILLGE GNPEHDVIKT CLLSGMGVVS SDTTIVTISK NSSERGITTR AKFLAFRIFT
101: DAVARKHGGD ANVKYGWYAG SRDEIQRIIS YGFSNRDVGK FENDGGSHGI GIHLVPSKCS LLAASATEQD EEGLRYLLLC RVILGKPEII ISGSKQSYPS
201: SAEFDSGVDD LHNPRNYVIW SCNMNSCILP SYIVSFRSPR LRVSRGGFAS RPSSPWVSFA SLMSMLSTSM DPSRMNLIIR TYDDFRKRKI RRDQLVRKMR
301: EVAGDNLLAE IIKNHKNRNK VTN

Arabidopsis Description

SRO2Probable inactive poly [ADP-ribose] polymerase SRO2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUD9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.