Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G22760.1 | KRH39574 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74370 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58189 | Soybean | nucleus | 92.45 | 89.79 |
| KRH28295 | Soybean | nucleus | 44.2 | 52.4 |
| KRH77195 | Soybean | nucleus | 48.52 | 48.91 |
| VIT_07s0205g00170.t01 | Wine grape | cytosol | 15.9 | 46.83 |
| KRH40248 | Soybean | cytosol | 16.71 | 43.06 |
| KRH77193 | Soybean | nucleus | 36.93 | 41.77 |
| KRH09683 | Soybean | nucleus | 28.57 | 40.46 |
| KRH04347 | Soybean | nucleus | 36.12 | 39.3 |
| KRH23621 | Soybean | nucleus | 29.92 | 38.14 |
| KRH58187 | Soybean | endoplasmic reticulum | 34.5 | 38.1 |
| KRH44509 | Soybean | nucleus | 21.83 | 38.03 |
| KRH47401 | Soybean | nucleus | 20.49 | 37.44 |
| KRH23623 | Soybean | nucleus | 21.56 | 36.7 |
| KRH23624 | Soybean | nucleus | 27.76 | 36.27 |
| KRH09685 | Soybean | cytosol | 28.84 | 36.15 |
| KRH44511 | Soybean | nucleus | 31.81 | 35.98 |
| KRH28296 | Soybean | nucleus | 33.69 | 35.82 |
| KRH42021 | Soybean | nucleus | 18.6 | 35.38 |
| KRH44510 | Soybean | nucleus | 25.88 | 34.91 |
| KRH47399 | Soybean | nucleus | 31.81 | 34.6 |
| KRH49880 | Soybean | nucleus | 30.46 | 34.35 |
| KRH00979 | Soybean | nucleus | 28.03 | 34.21 |
| KRH48860 | Soybean | nucleus | 28.84 | 33.86 |
| KRH04348 | Soybean | nucleus | 33.96 | 33.78 |
| KRH77192 | Soybean | nucleus | 31.0 | 33.72 |
| KRH10664 | Soybean | nucleus | 33.42 | 33.6 |
| KRH21680 | Soybean | nucleus, vacuole | 33.96 | 33.51 |
| KRH47400 | Soybean | nucleus | 23.99 | 33.09 |
| KRH66425 | Soybean | nucleus | 27.76 | 33.01 |
| KRH58186 | Soybean | nucleus | 32.08 | 32.96 |
| CDY13735 | Canola | nucleus | 24.8 | 31.83 |
| Bra039926.1-P | Field mustard | nucleus | 24.8 | 31.72 |
| KRH00980 | Soybean | nucleus | 17.25 | 31.53 |
| CDY52593 | Canola | nucleus | 23.72 | 30.88 |
| CDX89512 | Canola | nucleus | 24.53 | 30.74 |
| KRH00981 | Soybean | nucleus | 26.68 | 30.46 |
| KRH48858 | Soybean | nucleus | 25.88 | 29.81 |
| AT2G22770.1 | Thale cress | nucleus | 25.61 | 29.69 |
| KRH47398 | Soybean | nucleus | 29.38 | 29.46 |
| AT2G22760.1 | Thale cress | nucleus | 23.18 | 29.15 |
| KRH44512 | Soybean | nucleus | 29.38 | 29.07 |
| CDY25629 | Canola | nucleus | 23.45 | 29.0 |
| Bra030208.1-P | Field mustard | nucleus | 23.72 | 28.95 |
| CDX89513 | Canola | nucleus | 25.07 | 28.62 |
| CDY52591 | Canola | nucleus | 24.26 | 28.57 |
| Bra039927.1-P | Field mustard | nucleus | 24.26 | 28.48 |
| CDY25630 | Canola | nucleus | 24.8 | 28.31 |
| KRH40246 | Soybean | nucleus, vacuole | 20.49 | 28.15 |
| Bra030207.1-P | Field mustard | nucleus | 24.53 | 27.91 |
| KRH66407 | Soybean | nucleus | 29.11 | 27.69 |
| KRH48847 | Soybean | nucleus | 28.03 | 27.3 |
| KRH06400 | Soybean | nucleus | 16.44 | 13.09 |
| KRH47834 | Soybean | nucleus | 16.17 | 12.93 |
| KRH75613 | Soybean | nucleus | 20.75 | 12.09 |
| KRH19522 | Soybean | nucleus | 16.44 | 12.06 |
| KRH45440 | Soybean | nucleus | 21.02 | 11.93 |
| KRH68922 | Soybean | nucleus | 17.52 | 11.82 |
| KRH32144 | Soybean | nucleus | 15.9 | 11.71 |
| KRH74418 | Soybean | nucleus | 20.22 | 11.68 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 17.25 | 11.19 |
| KRH47899 | Soybean | nucleus | 18.6 | 11.02 |
| KRH06456 | Soybean | nucleus | 18.33 | 11.0 |
| KRG97199 | Soybean | nucleus | 18.33 | 10.99 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.71 | 10.54 |
| KRH32008 | Soybean | extracellular, plastid | 18.6 | 10.39 |
| KRH71432 | Soybean | nucleus | 18.06 | 10.26 |
| KRH39540 | Soybean | nucleus | 19.41 | 9.85 |
| KRH05127 | Soybean | nucleus, plastid | 7.55 | 9.56 |
| KRH41187 | Soybean | nucleus | 16.17 | 9.52 |
| KRH59908 | Soybean | nucleus | 15.9 | 9.35 |
| KRH65046 | Soybean | nucleus | 14.29 | 8.19 |
| KRH48144 | Soybean | nucleus | 14.02 | 8.0 |
Protein Annotations
| EntrezGene:100802862 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EMBL:ACUP02010404 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_17G155900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1MVF8 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH04346 | ProteinID:KRH04346 | ProteinID:KRH04346.1 |
| EMBL:KT031125 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF100 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000233EC41 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr17:+:13234061..13236463
Molecular Weight (calculated)
41352.7 Da
IEP (calculated)
5.176
GRAVY (calculated)
-0.513
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEELNKPMD GSATSWLSDL EMDDYNLFPD ECPLNLNMFD DREFLSQDIA SAFQEQTQTL QQQSLSSECP SKTVSNSSTD ETTFDFERPS KLLKTTTSTS
101: SNFDSSTITK TLSPKLSPSS SFQSQILSFD NTNTQFYEFH CTLNPTQNEM VSVSVPQKGK PRFPTQTPKG SPKYQNFETK TSHAKRSPAH AQDHIMAERK
201: RREKLSQSFI ALAALVPGLK KMDKASVLGD AIEYVKELKE RLTVLEEQSK KTRAESIVVL NKPDLSGDND SSSCDESIDA DSVSDSLFEV ESRVSGKEML
301: LKIHCQKQRG LLVKLLAEIQ SNHLFVANSS VLPFGNSILD ITIVAQMGES YNLTTKELAK NLRVAALKIL S
101: SNFDSSTITK TLSPKLSPSS SFQSQILSFD NTNTQFYEFH CTLNPTQNEM VSVSVPQKGK PRFPTQTPKG SPKYQNFETK TSHAKRSPAH AQDHIMAERK
201: RREKLSQSFI ALAALVPGLK KMDKASVLGD AIEYVKELKE RLTVLEEQSK KTRAESIVVL NKPDLSGDND SSSCDESIDA DSVSDSLFEV ESRVSGKEML
301: LKIHCQKQRG LLVKLLAEIQ SNHLFVANSS VLPFGNSILD ITIVAQMGES YNLTTKELAK NLRVAALKIL S
001: MNSLVGDVPQ SLSSLDDTTT CYNLDASCNK SLVEERPSKI LKTTHISPNL HPFSSSNPPP PKHQPSSRIL SFEKTGLHVM NHNSPNLIFS PKDEEIGLPE
101: HKKAELIIRG TKRAQSLTRS QSNAQDHILA ERKRREKLTQ RFVALSALIP GLKKMDKASV LGDAIKHIKY LQESVKEYEE QKKEKTMESV VLVKKSSLVL
201: DENHQPSSSS SSDGNRNSSS SNLPEIEVRV SGKDVLIKIL CEKQKGNVIK IMGEIEKLGL SITNSNVLPF GPTFDISIIA QKNNNFDMKI EDVVKNLSFG
301: LSKLT
101: HKKAELIIRG TKRAQSLTRS QSNAQDHILA ERKRREKLTQ RFVALSALIP GLKKMDKASV LGDAIKHIKY LQESVKEYEE QKKEKTMESV VLVKKSSLVL
201: DENHQPSSSS SSDGNRNSSS SNLPEIEVRV SGKDVLIKIL CEKQKGNVIK IMGEIEKLGL SITNSNVLPF GPTFDISIIA QKNNNFDMKI EDVVKNLSFG
301: LSKLT
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G22750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.