Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40246 | Soybean | nucleus, vacuole | 66.5 | 50.0 |
| KRH00981 | Soybean | nucleus | 61.58 | 38.46 |
| KRH00979 | Soybean | nucleus | 38.92 | 25.99 |
| KRH42021 | Soybean | nucleus | 24.63 | 25.64 |
| KRH44509 | Soybean | nucleus | 26.11 | 24.88 |
| KRH40248 | Soybean | cytosol | 16.75 | 23.61 |
| KRH09685 | Soybean | cytosol | 33.99 | 23.31 |
| KRH09683 | Soybean | nucleus | 30.05 | 23.28 |
| KRH23624 | Soybean | nucleus | 32.51 | 23.24 |
| KRH44511 | Soybean | nucleus | 36.95 | 22.87 |
| KRH23621 | Soybean | nucleus | 32.51 | 22.68 |
| KRH47401 | Soybean | nucleus | 22.66 | 22.66 |
| KRH23623 | Soybean | nucleus | 24.14 | 22.48 |
| KRH47399 | Soybean | nucleus | 37.44 | 22.29 |
| KRH47400 | Soybean | nucleus | 29.06 | 21.93 |
| KRH44510 | Soybean | nucleus | 29.56 | 21.82 |
| KRH66407 | Soybean | nucleus | 38.42 | 20.0 |
| KRH48847 | Soybean | nucleus | 37.44 | 19.95 |
| KRH77192 | Soybean | nucleus | 31.53 | 18.77 |
| KRH28296 | Soybean | nucleus | 32.02 | 18.62 |
| KRH04347 | Soybean | nucleus | 31.03 | 18.48 |
| KRH28295 | Soybean | nucleus | 28.08 | 18.21 |
| KRH58187 | Soybean | endoplasmic reticulum | 30.05 | 18.15 |
| KRH49880 | Soybean | nucleus | 28.57 | 17.63 |
| KRH44512 | Soybean | nucleus | 32.02 | 17.33 |
| KRH47398 | Soybean | nucleus | 31.53 | 17.3 |
| KRH58189 | Soybean | nucleus | 32.51 | 17.28 |
| KRH04346 | Soybean | nucleus | 31.53 | 17.25 |
| KRH77195 | Soybean | nucleus | 31.03 | 17.12 |
| KRH58186 | Soybean | nucleus | 30.05 | 16.9 |
| KRH04348 | Soybean | nucleus | 30.54 | 16.62 |
| KRH77193 | Soybean | nucleus | 26.11 | 16.16 |
| KRH10664 | Soybean | nucleus | 29.06 | 15.99 |
| KRH21680 | Soybean | nucleus, vacuole | 29.56 | 15.96 |
| KRH48858 | Soybean | nucleus | 25.12 | 15.84 |
| KRH66425 | Soybean | nucleus | 24.14 | 15.71 |
| KRH48860 | Soybean | nucleus | 24.14 | 15.51 |
| KRH47834 | Soybean | nucleus | 17.24 | 7.54 |
| KRH06400 | Soybean | nucleus | 17.24 | 7.51 |
| KRH32144 | Soybean | nucleus | 17.24 | 6.94 |
| KRH19522 | Soybean | nucleus | 17.24 | 6.92 |
| KRH05127 | Soybean | nucleus, plastid | 9.36 | 6.48 |
| KRH32008 | Soybean | extracellular, plastid | 21.18 | 6.48 |
| KRH71432 | Soybean | nucleus | 20.69 | 6.43 |
| KRH74418 | Soybean | nucleus | 20.2 | 6.39 |
| KRH68922 | Soybean | nucleus | 17.24 | 6.36 |
| KRH75613 | Soybean | nucleus | 19.21 | 6.12 |
| KRH45440 | Soybean | nucleus | 19.7 | 6.12 |
| KRH47899 | Soybean | nucleus | 18.72 | 6.07 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.75 | 5.94 |
| KRH06456 | Soybean | nucleus | 17.73 | 5.83 |
| KRG97199 | Soybean | nucleus | 17.73 | 5.82 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.75 | 5.78 |
| KRH41187 | Soybean | nucleus | 17.73 | 5.71 |
| KRH39540 | Soybean | nucleus | 19.21 | 5.34 |
| KRH59908 | Soybean | nucleus | 16.26 | 5.23 |
| KRH48144 | Soybean | nucleus | 14.78 | 4.62 |
| KRH65046 | Soybean | nucleus | 14.29 | 4.48 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | UniProt:A0A0R0FFQ5 | EMBL:ACUP02011487 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_18G246100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH00980 | ProteinID:KRH00980 | ProteinID:KRH00980.1 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF75 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0006ED98A7 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:53367993..53369121
Molecular Weight (calculated)
22902.4 Da
IEP (calculated)
6.673
GRAVY (calculated)
-0.465
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGDDFFNIQ SHGHMSPFNE EEYSSGERDM IVQQQVFSPN LSSSSLQSNL ELPYSSSPTG NVLSFDNPLV GSLHPQNDSA KSMEQSHCVE PKAYPRTNAQ
101: VHILAERKRR EELTRCIIAL SATIPGLKKT DKVSVLREAV NYVKQLQERV KELENQMRKE CVNSIILTKK ALICKNDRVE ELLEVKVTVL DKEKIFAQNI
201: VLA
101: VHILAERKRR EELTRCIIAL SATIPGLKKT DKVSVLREAV NYVKQLQERV KELENQMRKE CVNSIILTKK ALICKNDRVE ELLEVKVTVL DKEKIFAQNI
201: VLA
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.