Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G22760.1 | KRH39574 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74370 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH04348 | Soybean | nucleus | 89.2 | 86.33 |
| KRH28296 | Soybean | nucleus | 55.4 | 57.31 |
| KRH77192 | Soybean | nucleus | 51.52 | 54.55 |
| VIT_07s0205g00170.t01 | Wine grape | cytosol | 18.01 | 51.59 |
| KRH40248 | Soybean | cytosol | 16.62 | 41.67 |
| KRH09683 | Soybean | nucleus | 27.42 | 37.79 |
| KRH42021 | Soybean | nucleus | 20.22 | 37.44 |
| KRH23623 | Soybean | nucleus | 22.44 | 37.16 |
| KRH10664 | Soybean | nucleus | 37.67 | 36.86 |
| KRH23624 | Soybean | nucleus | 28.81 | 36.62 |
| KRH77193 | Soybean | nucleus | 33.24 | 36.59 |
| KRH21680 | Soybean | nucleus, vacuole | 37.95 | 36.44 |
| KRH28295 | Soybean | nucleus | 31.58 | 36.42 |
| KRH47401 | Soybean | nucleus | 19.94 | 35.47 |
| KRH04347 | Soybean | nucleus | 32.96 | 34.9 |
| KRH44509 | Soybean | nucleus | 20.5 | 34.74 |
| KRH49880 | Soybean | nucleus | 31.58 | 34.65 |
| KRH58187 | Soybean | endoplasmic reticulum | 32.13 | 34.52 |
| KRH77195 | Soybean | nucleus | 34.9 | 34.24 |
| CDX89512 | Canola | nucleus | 27.7 | 33.78 |
| KRH23621 | Soybean | nucleus | 26.87 | 33.33 |
| KRH09685 | Soybean | cytosol | 26.87 | 32.77 |
| KRH44510 | Soybean | nucleus | 24.93 | 32.73 |
| KRH66425 | Soybean | nucleus | 28.25 | 32.69 |
| KRH58189 | Soybean | nucleus | 34.35 | 32.46 |
| KRH47400 | Soybean | nucleus | 24.1 | 32.34 |
| KRH04346 | Soybean | nucleus | 32.96 | 32.08 |
| Bra039927.1-P | Field mustard | nucleus | 27.98 | 31.96 |
| CDY52591 | Canola | nucleus | 27.7 | 31.75 |
| CDY25629 | Canola | nucleus | 26.32 | 31.67 |
| Bra030208.1-P | Field mustard | nucleus | 26.59 | 31.58 |
| AT2G22770.1 | Thale cress | nucleus | 27.98 | 31.56 |
| CDY13735 | Canola | nucleus | 25.21 | 31.49 |
| CDY25630 | Canola | nucleus | 28.25 | 31.38 |
| Bra039926.1-P | Field mustard | nucleus | 25.21 | 31.38 |
| KRH47399 | Soybean | nucleus | 29.64 | 31.38 |
| KRH48860 | Soybean | nucleus | 27.42 | 31.33 |
| CDY52593 | Canola | nucleus | 24.65 | 31.23 |
| CDX89513 | Canola | nucleus | 27.98 | 31.08 |
| KRH48858 | Soybean | nucleus | 27.7 | 31.06 |
| Bra030207.1-P | Field mustard | nucleus | 27.98 | 30.98 |
| AT2G22760.1 | Thale cress | nucleus | 25.21 | 30.85 |
| KRH00979 | Soybean | nucleus | 25.48 | 30.26 |
| KRH44511 | Soybean | nucleus | 27.42 | 30.18 |
| KRH00980 | Soybean | nucleus | 16.9 | 30.05 |
| KRH47398 | Soybean | nucleus | 28.53 | 27.84 |
| KRH48847 | Soybean | nucleus | 29.09 | 27.56 |
| KRH44512 | Soybean | nucleus | 28.53 | 27.47 |
| KRH66407 | Soybean | nucleus | 29.09 | 26.92 |
| KRH00981 | Soybean | nucleus | 22.71 | 25.23 |
| KRH40246 | Soybean | nucleus, vacuole | 18.84 | 25.19 |
| KRH06400 | Soybean | nucleus | 19.11 | 14.81 |
| KRH47834 | Soybean | nucleus | 18.56 | 14.44 |
| KRH75613 | Soybean | nucleus | 22.71 | 12.87 |
| KRH45440 | Soybean | nucleus | 22.99 | 12.69 |
| KRH74418 | Soybean | nucleus | 21.88 | 12.31 |
| KRH19522 | Soybean | nucleus | 17.17 | 12.25 |
| KRH32144 | Soybean | nucleus | 16.9 | 12.1 |
| KRH68922 | Soybean | nucleus | 17.73 | 11.64 |
| KRH06456 | Soybean | nucleus | 18.56 | 10.84 |
| KRG97199 | Soybean | nucleus | 18.28 | 10.66 |
| KRH47899 | Soybean | nucleus | 18.28 | 10.54 |
| KRH39540 | Soybean | nucleus | 21.33 | 10.53 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.62 | 10.49 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.9 | 10.37 |
| KRH41187 | Soybean | nucleus | 17.17 | 9.84 |
| KRH71432 | Soybean | nucleus | 17.45 | 9.65 |
| KRH59908 | Soybean | nucleus | 16.62 | 9.51 |
| KRH32008 | Soybean | extracellular, plastid | 17.45 | 9.49 |
| KRH05127 | Soybean | nucleus, plastid | 6.93 | 8.53 |
| KRH48144 | Soybean | nucleus | 13.85 | 7.69 |
| KRH65046 | Soybean | nucleus | 13.3 | 7.42 |
Protein Annotations
| EntrezGene:100798011 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EMBL:ACUP02003224 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_05G110600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:K7KPK5 | EnsemblPlants:KRH58186 | ProteinID:KRH58186 | ProteinID:KRH58186.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF75 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0002959792 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:29340394..29344009
Molecular Weight (calculated)
40349.2 Da
IEP (calculated)
7.273
GRAVY (calculated)
-0.610
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MMQISSTMYM PEFGMEDPTL FHQYPMDNSV LFQLEDLDFE SFSASPKNSS SPKRFNSEST QNSSLTQNPE QYSVTPPRPT KQNKTVSTTW SAYNTHDMMA
101: PKASSSSSSK IISFENSNAS SVTSQQLYNV DAASKVKKPK SETGYGENLD FAAAAASQSV YDNNSFLDHY DTREKKAAAS LTRNPTQAQD HVISERKRRE
201: KLSQRFIALS AIIPGLKKMD KATVLEDAIK YVKQLQERVK TLEEQAVDKT VESAVFVKRS VVFAGDDSSD NDENSDQSLP KIEARISGKE VLIRIHSDKH
301: SGGAAAILRE LEKHHLTVQS SSFLPFGNNT FDITIVAKMN MDYCFTAKDL IRSLSRCLRQ L
101: PKASSSSSSK IISFENSNAS SVTSQQLYNV DAASKVKKPK SETGYGENLD FAAAAASQSV YDNNSFLDHY DTREKKAAAS LTRNPTQAQD HVISERKRRE
201: KLSQRFIALS AIIPGLKKMD KATVLEDAIK YVKQLQERVK TLEEQAVDKT VESAVFVKRS VVFAGDDSSD NDENSDQSLP KIEARISGKE VLIRIHSDKH
301: SGGAAAILRE LEKHHLTVQS SSFLPFGNNT FDITIVAKMN MDYCFTAKDL IRSLSRCLRQ L
001: MNVFSTKWSS ELDIEEYSII HQFHMNSLVG DVPQSLSSLD DTTTCYNLDA SCNKSLVEER PSKILKTTHI SPNLHPFSSS NPPPPKHQPS SRILSFEKTG
101: LHVMNHNSPN LIFSPKDEEI GLPEHKKAEL IIRGTKRAQS LTRSQSNAQD HILAERKRRE KLTQRFVALS ALIPGLKKMD KASVLGDAIK HIKYLQESVK
201: EYEEQKKEKT MESVVLVKKS SLVLDENHQP SSSSSSDGNR NSSSSNLPEI EVRVSGKDVL IKILCEKQKG NVIKIMGEIE KLGLSITNSN VLPFGPTFDI
301: SIIAQKNNNF DMKIEDVVKN LSFGLSKLT
101: LHVMNHNSPN LIFSPKDEEI GLPEHKKAEL IIRGTKRAQS LTRSQSNAQD HILAERKRRE KLTQRFVALS ALIPGLKKMD KASVLGDAIK HIKYLQESVK
201: EYEEQKKEKT MESVVLVKKS SLVLDENHQP SSSSSSDGNR NSSSSNLPEI EVRVSGKDVL IKILCEKQKG NVIKIMGEIE KLGLSITNSN VLPFGPTFDI
301: SIIAQKNNNF DMKIEDVVKN LSFGLSKLT
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G22750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.