Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT2G22760.1 | KRH39574 | AT1G32230.1 | 19548978 |
AT2G22760.1 | KRH74370 | AT1G32230.1 | 19548978 |
AT2G22760.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH28296 | Soybean | nucleus | 86.8 | 84.81 |
KRH04348 | Soybean | nucleus | 56.6 | 51.74 |
KRH58186 | Soybean | nucleus | 54.55 | 51.52 |
VIT_07s0205g00170.t01 | Wine grape | cytosol | 17.01 | 46.03 |
KRH40248 | Soybean | cytosol | 17.89 | 42.36 |
KRH42021 | Soybean | nucleus | 20.82 | 36.41 |
KRH09683 | Soybean | nucleus | 27.57 | 35.88 |
KRH10664 | Soybean | nucleus | 38.42 | 35.5 |
KRH49880 | Soybean | nucleus | 33.43 | 34.65 |
KRH21680 | Soybean | nucleus, vacuole | 37.83 | 34.31 |
KRH28295 | Soybean | nucleus | 31.38 | 34.19 |
KRH77193 | Soybean | nucleus | 32.55 | 33.84 |
KRH44509 | Soybean | nucleus | 21.11 | 33.8 |
KRH47401 | Soybean | nucleus | 19.94 | 33.5 |
KRH23624 | Soybean | nucleus | 27.86 | 33.45 |
KRH23623 | Soybean | nucleus | 21.11 | 33.03 |
KRH04347 | Soybean | nucleus | 32.26 | 32.26 |
KRH44510 | Soybean | nucleus | 25.51 | 31.64 |
KRH58187 | Soybean | endoplasmic reticulum | 31.09 | 31.55 |
KRH00980 | Soybean | nucleus | 18.77 | 31.53 |
CDX89512 | Canola | nucleus | 27.27 | 31.42 |
KRH58189 | Soybean | nucleus | 35.19 | 31.41 |
Bra039926.1-P | Field mustard | nucleus | 26.69 | 31.38 |
AT2G22760.1 | Thale cress | nucleus | 26.98 | 31.19 |
CDY13735 | Canola | nucleus | 26.39 | 31.14 |
KRH44511 | Soybean | nucleus | 29.91 | 31.1 |
KRH66425 | Soybean | nucleus | 28.45 | 31.09 |
KRH47399 | Soybean | nucleus | 31.09 | 31.09 |
CDY25629 | Canola | nucleus | 27.27 | 31.0 |
KRH04346 | Soybean | nucleus | 33.72 | 31.0 |
CDY52593 | Canola | nucleus | 25.81 | 30.88 |
KRH77195 | Soybean | nucleus | 33.14 | 30.71 |
Bra030208.1-P | Field mustard | nucleus | 27.27 | 30.59 |
KRH48858 | Soybean | nucleus | 28.74 | 30.43 |
KRH09685 | Soybean | cytosol | 26.39 | 30.41 |
KRH23621 | Soybean | nucleus | 25.81 | 30.24 |
KRH47400 | Soybean | nucleus | 23.75 | 30.11 |
KRH00979 | Soybean | nucleus | 26.69 | 29.93 |
Bra039927.1-P | Field mustard | nucleus | 27.57 | 29.75 |
KRH48860 | Soybean | nucleus | 27.27 | 29.43 |
CDY25630 | Canola | nucleus | 27.86 | 29.23 |
CDY52591 | Canola | nucleus | 26.98 | 29.21 |
AT2G22770.1 | Thale cress | nucleus | 27.27 | 29.06 |
Bra030207.1-P | Field mustard | nucleus | 27.57 | 28.83 |
CDX89513 | Canola | nucleus | 27.27 | 28.62 |
KRH00981 | Soybean | nucleus | 26.39 | 27.69 |
KRH40246 | Soybean | nucleus, vacuole | 21.41 | 27.04 |
KRH47398 | Soybean | nucleus | 27.86 | 25.68 |
KRH66407 | Soybean | nucleus | 28.74 | 25.13 |
KRH44512 | Soybean | nucleus | 27.27 | 24.8 |
KRH48847 | Soybean | nucleus | 27.27 | 24.41 |
KRH06400 | Soybean | nucleus | 21.7 | 15.88 |
KRH47834 | Soybean | nucleus | 21.11 | 15.52 |
KRH75613 | Soybean | nucleus | 24.05 | 12.87 |
KRH74418 | Soybean | nucleus | 24.05 | 12.77 |
KRH45440 | Soybean | nucleus | 23.75 | 12.39 |
KRH32144 | Soybean | nucleus | 17.6 | 11.9 |
KRH19522 | Soybean | nucleus | 17.3 | 11.66 |
KRH68922 | Soybean | nucleus | 18.18 | 11.27 |
KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 18.18 | 10.84 |
KRH06456 | Soybean | nucleus | 19.35 | 10.68 |
KRH39540 | Soybean | nucleus | 22.87 | 10.67 |
KRG97199 | Soybean | nucleus | 19.06 | 10.5 |
KRH47899 | Soybean | nucleus | 18.77 | 10.22 |
KRH71432 | Soybean | nucleus | 19.35 | 10.11 |
KRH41187 | Soybean | nucleus | 18.48 | 10.0 |
KRH32008 | Soybean | extracellular, plastid | 19.35 | 9.94 |
KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 17.01 | 9.86 |
KRH59908 | Soybean | nucleus | 17.89 | 9.67 |
KRH05127 | Soybean | nucleus, plastid | 7.92 | 9.22 |
KRH48144 | Soybean | nucleus | 15.54 | 8.15 |
KRH65046 | Soybean | nucleus | 15.25 | 8.04 |
Protein Annotations
EntrezGene:100815491 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EMBL:ACUP02000659 | ncoils:Coil |
EnsemblPlantsGene:GLYMA_01G197900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
InterPro:IPR011598 | InterPro:IPR036638 | UniProt:K7K4T1 | EnsemblPlants:KRH77192 | ProteinID:KRH77192 | ProteinID:KRH77192.1 |
PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF75 | SMART:SM00353 | SUPFAM:SSF47459 |
UniParc:UPI000296DA9C | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:53190468..53192016
Molecular Weight (calculated)
38272.7 Da
IEP (calculated)
5.588
GRAVY (calculated)
-0.498
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIAYNYYLP ELQEIEDPTF FDQYQMDSFA CPLDDFDFES FSGSPESNSS YHFNSESTPN CFPAESHDQS FTPARPTKRL KNTCASDFIS HKVSAFSSSQ
101: LISFGHFNAP SPSHASQQFQ NLDFDEKASS ENMDFAAFVS QGSYEDKSFL SSDNRTNQVG ITTRNPIQAQ EHIIAERKRR ENISKRFIAL SAILPGLKKM
201: DKASVLGDAV KYVKQLQERV QTLEEQAAKR TLGSGVLVKR SIIFADDETS DSHCEHSLPE VEVRVSGKDV LIRTQCDKHS GHAAMILSEL EKLYFIVQSS
301: SFLPFGNSKT DVTIIAQMNK ENCMTAKDLL GRLRQALVGH N
101: LISFGHFNAP SPSHASQQFQ NLDFDEKASS ENMDFAAFVS QGSYEDKSFL SSDNRTNQVG ITTRNPIQAQ EHIIAERKRR ENISKRFIAL SAILPGLKKM
201: DKASVLGDAV KYVKQLQERV QTLEEQAAKR TLGSGVLVKR SIIFADDETS DSHCEHSLPE VEVRVSGKDV LIRTQCDKHS GHAAMILSEL EKLYFIVQSS
301: SFLPFGNSKT DVTIIAQMNK ENCMTAKDLL GRLRQALVGH N
001: MDEDFFLPDF SLVDIDFDFN IYEENNLSPD ESLSNSRRAD QSSKFDHQMH FECLREKPKA AVKPMMKINN KQQLISFDFS SNVISSPAAE EIIMDKLVGR
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
Arabidopsis Description
BHLH19Uncharacterized protein At2g22760 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.