Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66425 | Soybean | nucleus | 59.01 | 60.9 |
| KRH48860 | Soybean | nucleus | 56.83 | 57.91 |
| KRH40248 | Soybean | cytosol | 18.32 | 40.97 |
| KRH23623 | Soybean | nucleus | 26.4 | 38.99 |
| KRH47401 | Soybean | nucleus | 22.36 | 35.47 |
| KRH09683 | Soybean | nucleus | 27.64 | 33.97 |
| KRH44509 | Soybean | nucleus | 22.36 | 33.8 |
| KRH23624 | Soybean | nucleus | 28.88 | 32.75 |
| KRH23621 | Soybean | nucleus | 29.5 | 32.65 |
| KRH47400 | Soybean | nucleus | 26.71 | 31.97 |
| KRH47399 | Soybean | nucleus | 33.85 | 31.96 |
| KRH44510 | Soybean | nucleus | 27.02 | 31.64 |
| KRH09685 | Soybean | cytosol | 28.26 | 30.74 |
| KRH44511 | Soybean | nucleus | 30.75 | 30.18 |
| KRH28295 | Soybean | nucleus | 28.57 | 29.39 |
| KRH00979 | Soybean | nucleus | 27.33 | 28.95 |
| KRH77192 | Soybean | nucleus | 30.43 | 28.74 |
| KRH77195 | Soybean | nucleus | 32.3 | 28.26 |
| KRH47398 | Soybean | nucleus | 32.3 | 28.11 |
| KRH58186 | Soybean | nucleus | 31.06 | 27.7 |
| KRH66407 | Soybean | nucleus | 33.54 | 27.69 |
| KRH28296 | Soybean | nucleus | 29.81 | 27.51 |
| KRH44512 | Soybean | nucleus | 31.99 | 27.47 |
| KRH77193 | Soybean | nucleus | 27.95 | 27.44 |
| KRH49880 | Soybean | nucleus | 27.95 | 27.36 |
| KRH48847 | Soybean | nucleus | 32.3 | 27.3 |
| KRH58187 | Soybean | endoplasmic reticulum | 27.33 | 26.19 |
| KRH04347 | Soybean | nucleus | 27.64 | 26.1 |
| KRH04346 | Soybean | nucleus | 29.81 | 25.88 |
| KRH04348 | Soybean | nucleus | 29.81 | 25.74 |
| KRH42021 | Soybean | nucleus | 15.53 | 25.64 |
| KRH58189 | Soybean | nucleus | 29.81 | 25.13 |
| KRH00980 | Soybean | nucleus | 15.84 | 25.12 |
| KRH00981 | Soybean | nucleus | 25.16 | 24.92 |
| KRH21680 | Soybean | nucleus, vacuole | 28.57 | 24.47 |
| KRH10664 | Soybean | nucleus | 27.95 | 24.39 |
| KRH40246 | Soybean | nucleus, vacuole | 18.94 | 22.59 |
| KRH06400 | Soybean | nucleus | 17.7 | 12.23 |
| KRH47834 | Soybean | nucleus | 17.08 | 11.85 |
| KRH74418 | Soybean | nucleus | 18.94 | 9.5 |
| KRH75613 | Soybean | nucleus | 18.32 | 9.26 |
| KRH45440 | Soybean | nucleus | 18.32 | 9.02 |
| KRH32144 | Soybean | nucleus | 13.66 | 8.73 |
| KRH47899 | Soybean | nucleus | 16.77 | 8.63 |
| KRH06456 | Soybean | nucleus | 16.46 | 8.58 |
| KRH68922 | Soybean | nucleus | 14.6 | 8.55 |
| KRH19522 | Soybean | nucleus | 13.35 | 8.5 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 14.91 | 8.39 |
| KRH05127 | Soybean | nucleus, plastid | 7.45 | 8.19 |
| KRG97199 | Soybean | nucleus | 15.53 | 8.08 |
| KRH39540 | Soybean | nucleus | 18.32 | 8.07 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 14.29 | 7.82 |
| KRH71432 | Soybean | nucleus | 15.84 | 7.81 |
| KRH41187 | Soybean | nucleus | 14.91 | 7.62 |
| KRH32008 | Soybean | extracellular, plastid | 15.53 | 7.53 |
| KRH59908 | Soybean | nucleus | 13.98 | 7.13 |
| KRH65046 | Soybean | nucleus | 12.42 | 6.18 |
| KRH48144 | Soybean | nucleus | 12.42 | 6.15 |
Protein Annotations
| EntrezGene:100799087 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EMBL:ACUP02004299 | EMBL:BT096818 |
| UniProt:C6TGR5 | ncoils:Coil | EnsemblPlantsGene:GLYMA_07G117500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH48858 | ProteinID:KRH48858 |
| ProteinID:KRH48858.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF75 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0001B16CA9 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr7:-:13225360..13229175
Molecular Weight (calculated)
36625.9 Da
IEP (calculated)
7.612
GRAVY (calculated)
-0.493
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESPERWLR FLEMDECNLF GHMHSLVEVF KGENLVQQEK SCKSHPCDSN ITKESTTILL RNPINDSSSL EKNPGFDNRS SLKQHASQDE PLFSSSSMPY
101: TLSFEDSTAV PYVLNKTCQC YHGENSKETQ EEPKNNRKSK RGRSSSEIQD HIMSERKRRE NIAKLFIALS AVIPVLKKTD KASVLKTAID YVKYLQKRVK
201: DLEEESKKRK VEYAVCFKTN KYNIGTVVDD SDIPINIRPK IEARVSGKDA LIKVMCEKRK DIVAKILGKL AALNLSIVCC NVLPFANSAL NITCIAQMDH
301: EFTMTLDDLV KILTEDLFDC CN
101: TLSFEDSTAV PYVLNKTCQC YHGENSKETQ EEPKNNRKSK RGRSSSEIQD HIMSERKRRE NIAKLFIALS AVIPVLKKTD KASVLKTAID YVKYLQKRVK
201: DLEEESKKRK VEYAVCFKTN KYNIGTVVDD SDIPINIRPK IEARVSGKDA LIKVMCEKRK DIVAKILGKL AALNLSIVCC NVLPFANSAL NITCIAQMDH
301: EFTMTLDDLV KILTEDLFDC CN
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.