Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G22760.1 | KRH39574 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74370 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28295 | Soybean | nucleus | 71.2 | 83.71 |
| VIT_07s0205g00170.t01 | Wine grape | cytosol | 17.39 | 50.79 |
| KRH58189 | Soybean | nucleus | 52.17 | 50.26 |
| KRH04346 | Soybean | nucleus | 48.91 | 48.52 |
| KRH40248 | Soybean | cytosol | 17.12 | 43.75 |
| KRH77193 | Soybean | nucleus | 38.86 | 43.6 |
| KRH09683 | Soybean | nucleus | 30.71 | 43.13 |
| KRH47401 | Soybean | nucleus | 23.37 | 42.36 |
| KRH44509 | Soybean | nucleus | 23.64 | 40.85 |
| KRH23621 | Soybean | nucleus | 31.79 | 40.21 |
| KRH04347 | Soybean | nucleus | 37.23 | 40.18 |
| KRH23624 | Soybean | nucleus | 30.71 | 39.79 |
| KRH09685 | Soybean | cytosol | 31.25 | 38.85 |
| KRH23623 | Soybean | nucleus | 22.83 | 38.53 |
| KRH58187 | Soybean | endoplasmic reticulum | 34.78 | 38.1 |
| KRH49880 | Soybean | nucleus | 33.7 | 37.69 |
| CDX89512 | Canola | nucleus | 29.35 | 36.49 |
| KRH21680 | Soybean | nucleus, vacuole | 36.96 | 36.17 |
| KRH10664 | Soybean | nucleus | 36.14 | 36.04 |
| KRH44511 | Soybean | nucleus | 32.07 | 35.98 |
| CDY13735 | Canola | nucleus | 27.99 | 35.64 |
| KRH28296 | Soybean | nucleus | 33.7 | 35.53 |
| Bra039926.1-P | Field mustard | nucleus | 27.99 | 35.52 |
| CDY52593 | Canola | nucleus | 27.17 | 35.09 |
| KRH58186 | Soybean | nucleus | 34.24 | 34.9 |
| KRH47399 | Soybean | nucleus | 32.34 | 34.9 |
| KRH04348 | Soybean | nucleus | 34.78 | 34.32 |
| KRH47400 | Soybean | nucleus | 25.0 | 34.2 |
| AT2G22760.1 | Thale cress | nucleus | 27.17 | 33.9 |
| Bra030208.1-P | Field mustard | nucleus | 27.99 | 33.88 |
| CDY25629 | Canola | nucleus | 27.45 | 33.67 |
| KRH42021 | Soybean | nucleus | 17.66 | 33.33 |
| KRH00979 | Soybean | nucleus | 27.45 | 33.22 |
| KRH77192 | Soybean | nucleus | 30.71 | 33.14 |
| KRH44510 | Soybean | nucleus | 24.46 | 32.73 |
| KRH66425 | Soybean | nucleus | 27.72 | 32.69 |
| KRH48858 | Soybean | nucleus | 28.26 | 32.3 |
| KRH48860 | Soybean | nucleus | 27.72 | 32.28 |
| KRH47398 | Soybean | nucleus | 32.07 | 31.89 |
| KRH66407 | Soybean | nucleus | 33.42 | 31.54 |
| KRH00981 | Soybean | nucleus | 27.72 | 31.38 |
| KRH48847 | Soybean | nucleus | 32.34 | 31.23 |
| CDY52591 | Canola | nucleus | 26.63 | 31.11 |
| KRH00980 | Soybean | nucleus | 17.12 | 31.03 |
| Bra039927.1-P | Field mustard | nucleus | 26.63 | 31.01 |
| KRH44512 | Soybean | nucleus | 31.52 | 30.93 |
| CDX89513 | Canola | nucleus | 27.17 | 30.77 |
| Bra030207.1-P | Field mustard | nucleus | 26.9 | 30.37 |
| CDY25630 | Canola | nucleus | 26.63 | 30.15 |
| AT2G22770.1 | Thale cress | nucleus | 26.09 | 30.0 |
| KRH40246 | Soybean | nucleus, vacuole | 20.92 | 28.52 |
| KRH06400 | Soybean | nucleus | 15.76 | 12.45 |
| KRH75613 | Soybean | nucleus | 21.2 | 12.24 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 19.02 | 12.24 |
| KRH74418 | Soybean | nucleus | 21.2 | 12.15 |
| KRH47834 | Soybean | nucleus | 15.22 | 12.07 |
| KRH45440 | Soybean | nucleus | 21.2 | 11.93 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 18.48 | 11.56 |
| KRH32144 | Soybean | nucleus | 15.76 | 11.51 |
| KRH32008 | Soybean | extracellular, plastid | 20.65 | 11.45 |
| KRH71432 | Soybean | nucleus | 20.11 | 11.33 |
| KRH68922 | Soybean | nucleus | 16.85 | 11.27 |
| KRH19522 | Soybean | nucleus | 15.22 | 11.07 |
| KRH05127 | Soybean | nucleus, plastid | 8.7 | 10.92 |
| KRG97199 | Soybean | nucleus | 16.85 | 10.02 |
| KRH39540 | Soybean | nucleus | 19.57 | 9.85 |
| KRH47899 | Soybean | nucleus | 16.58 | 9.74 |
| KRH06456 | Soybean | nucleus | 16.3 | 9.71 |
| KRH41187 | Soybean | nucleus | 16.03 | 9.37 |
| KRH59908 | Soybean | nucleus | 16.03 | 9.35 |
| KRH65046 | Soybean | nucleus | 16.03 | 9.12 |
| KRH48144 | Soybean | nucleus | 15.76 | 8.92 |
Protein Annotations
| EntrezGene:100816551 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EMBL:ACUP02000659 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_01G198100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:K7K4T4 | EnsemblPlants:KRH77195 | ProteinID:KRH77195 | ProteinID:KRH77195.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF48 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000296D18E | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:53209719..53211774
Molecular Weight (calculated)
41200.6 Da
IEP (calculated)
5.984
GRAVY (calculated)
-0.560
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MENNNTSMDA SEASWLSDLL LQETEDGCNL FRQCHLETLL DDDEELLSHE IASAFENLQQ PLSSESNTSY SEAPMNSFTE ETSFEKPIKQ PKTNASSWNS
101: SFTKHFSLSS SPSSPTSKIL SFENSNSSPP NPNNTDQFHG IVVSSALSPK QIKTKGASVS LPHTRKRLSE NQNFEAESPK GHRSYKSPSH VRDHIIAERK
201: RREKLSQSLI ALAALIPGLK KMDKASVLGD AIKYVKELQE RMRMLEEEDK NRDVESVVMV KKQRLSCCDD GSASHEDEEN SERLPRVEAR VLEKDVLLRI
301: HCQKQKGLLL NILVEIQNLH LFVVNSSVLP FGDSVLDITI VAQMGTGYNL TINDLVKNLR VATLKSMS
101: SFTKHFSLSS SPSSPTSKIL SFENSNSSPP NPNNTDQFHG IVVSSALSPK QIKTKGASVS LPHTRKRLSE NQNFEAESPK GHRSYKSPSH VRDHIIAERK
201: RREKLSQSLI ALAALIPGLK KMDKASVLGD AIKYVKELQE RMRMLEEEDK NRDVESVVMV KKQRLSCCDD GSASHEDEEN SERLPRVEAR VLEKDVLLRI
301: HCQKQKGLLL NILVEIQNLH LFVVNSSVLP FGDSVLDITI VAQMGTGYNL TINDLVKNLR VATLKSMS
001: MATAMNVFST KWSSELDIEE YSIIHQFHMN SLVGDVPQSL SSLDDTTTCY NLDASCNKSL VEERPSKILK TTHISPNLHP FSSSNPPPPK HQPSSRILSF
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQK NNNFDMKIED VVKNLSFGLS KLT
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQK NNNFDMKIED VVKNLSFGLS KLT
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G22750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.