CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH02523
KRH11175
KRH12644
KRH19420
KRH21078
KRH37606
KRH39044
KRH42552
KRH58647

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32640.1	KRH11175	AT1G30135.1	19309455
AT1G32640.1	KRH21078	AT1G30135.1	19309455
AT1G32640.1	KRH42552	AT1G30135.1	19309455
AT1G32640.1	KRH58647	AT1G30135.1	19309455
AT1G32640.1	KRH39044	AT1G48500.1	19309455
AT1G32640.1	KRH39044	AT3G17860.1	17637675
AT1G32640.1	KRH02523	AT3G43440.1	19309455
AT1G32640.1	KRH12644	AT3G43440.1	19309455
AT1G32640.1	KRH19420	AT3G43440.1	19309455
AT1G32640.1	KRH37606	AT3G43440.1	19309455

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75613	Soybean	nucleus	88.53	90.89
Bra017527.1-P	Field mustard	nucleus	22.48	65.04
KRH74418	Soybean	nucleus	63.3	64.49
VIT_02s0012g01320.t01	Wine grape	nucleus	64.37	63.5
Solyc08g005050.2.1	Tomato	nucleus	43.73	61.64
CDX77688	Canola	nucleus	42.35	61.28
CDY58502	Canola	nucleus	42.05	61.25
KRH05127	Soybean	nucleus, plastid	27.37	61.09
CDX73261	Canola	nucleus	41.13	60.72
CDY26910	Canola	nucleus	40.98	60.5
PGSC0003DMT400002963	Potato	nucleus	53.52	58.53
Bra013263.1-P	Field mustard	nucleus	24.16	58.3
Bra010178.1-P	Field mustard	nucleus	53.36	58.17
CDY03195	Canola	nucleus	48.47	58.17
KRH39540	Soybean	nucleus	64.98	58.14
AT1G32640.1	Thale cress	nucleus	54.13	56.82
AT4G17880.1	Thale cress	nucleus	50.92	56.54
Solyc08g076930.1.1	Tomato	nucleus	59.33	56.31
CDY35179	Canola	nucleus	48.32	56.23
CDX84081	Canola	nucleus	45.11	55.77
PGSC0003DMT400045204	Potato	nucleus	59.17	55.76
Bra024998.1-P	Field mustard	nucleus	48.01	54.14
CDX78808	Canola	nucleus	47.55	53.71
AT5G46760.1	Thale cress	nucleus	48.47	53.55
CDY44507	Canola	nucleus	47.86	53.41
Bra013264.1-P	Field mustard	nucleus	22.94	50.51
CDY03185	Canola	nucleus	35.47	49.05
HORVU1Hr1G050560.1	Barley	nucleus	50.31	48.1
Zm00001d030028_P001	Maize	nucleus	51.38	47.66
Os10t0575000-01	Rice	nucleus	50.76	47.5
TraesCS1B01G208000.1	Wheat	nucleus	50.31	47.47
Bra017520.1-P	Field mustard	nucleus	36.09	47.39
CDY59973	Canola	nucleus	36.85	47.35
KXG39194	Sorghum	nucleus	51.07	47.24
TraesCS1D01G196900.1	Wheat	nucleus	50.15	47.19
CDY35183	Canola	nucleus	36.54	47.14
Zm00001d047017_P001	Maize	nucleus	50.61	47.08
Bra017523.1-P	Field mustard	nucleus	36.39	46.94
CDY03183	Canola	nucleus	36.39	46.76
AT5G46830.1	Thale cress	nucleus	36.09	46.18
CDX77696	Canola	nucleus	8.41	45.83
TraesCS1A01G193200.1	Wheat	nucleus	47.86	45.17
Bra024993.1-P	Field mustard	nucleus	25.38	44.03
CDX77699	Canola	nucleus	17.89	43.17
Bra024992.1-P	Field mustard	nucleus	17.74	42.8
CDY33482	Canola	nucleus	17.58	42.44
KRH47834	Soybean	nucleus	27.98	39.44
KRH06400	Soybean	nucleus	27.68	38.84
HORVU0Hr1G025420.1	Barley	cytosol, nucleus	9.63	38.41
Zm00001d031717_P001	Maize	nucleus	13.91	35.83
TraesCS5B01G306600.1	Wheat	nucleus	14.83	35.53
TraesCS5D01G313400.1	Wheat	nucleus	14.68	35.16
TraesCS2B01G469200.1	Wheat	nucleus	13.15	34.96
TraesCSU01G222600.1	Wheat	nucleus	13.15	34.96
TraesCS1A01G369200.1	Wheat	nucleus	10.55	34.85
OQU86344	Sorghum	nucleus	13.61	34.77
TraesCS5A01G306600.1	Wheat	nucleus	14.53	34.55
TraesCS7D01G102200.1	Wheat	nucleus	13.46	34.38
TraesCS1D01G374800.1	Wheat	nucleus	13.91	34.34
TraesCS5A01G306700.1	Wheat	peroxisome	14.37	34.31
Zm00001d052728_P001	Maize	nucleus	14.37	34.18
KXG25462	Sorghum	nucleus	14.53	34.17
TraesCS5A01G306500.1	Wheat	nucleus	14.68	34.16
TraesCS5A01G306200.1	Wheat	nucleus	14.53	34.05
TraesCS5B01G307000.1	Wheat	nucleus	14.53	34.05
TraesCS5D01G313600.1	Wheat	nucleus	14.53	34.05
TraesCS2B01G469300.1	Wheat	nucleus	13.3	33.98
HORVU5Hr1G080040.1	Barley	nucleus	13.91	33.96
Os09t0519100-00	Rice	nucleus	13.61	33.71
TraesCS5D01G313500.1	Wheat	nucleus	14.37	33.69
TraesCS2A01G448500.1	Wheat	nucleus	13.15	33.59
OQU75588	Sorghum	nucleus	13.46	33.46
OQU80776	Sorghum	nucleus	13.46	33.46
TraesCS5D01G313700.1	Wheat	nucleus	14.07	33.45
EER99201	Sorghum	nucleus	15.14	33.45
Zm00001d006150_P001	Maize	nucleus	14.68	32.99
EER97058	Sorghum	cytosol, nucleus, plastid	13.91	32.97
TraesCS5B01G307100.1	Wheat	nucleus	13.76	32.97
OQU80778	Sorghum	nucleus	13.61	32.96
TraesCS5A01G306400.1	Wheat	nucleus	11.01	32.29
OQU80775	Sorghum	cytosol, nucleus, peroxisome, plastid	13.76	32.26
TraesCS1B01G387900.1	Wheat	nucleus	11.77	32.22
TraesCS5B01G306800.1	Wheat	nucleus	13.61	31.79
Os08t0543700-00	Rice	nucleus, peroxisome, plastid	12.69	31.56
OQU80777	Sorghum	nucleus	13.46	31.43
Zm00001d021164_P001	Maize	nucleus	13.91	31.38
KRH19522	Soybean	nucleus	23.85	30.83
KRH32144	Soybean	nucleus	23.55	30.56
HORVU5Hr1G080080.1	Barley	nucleus, plastid	9.79	30.48
HORVU5Hr1G079900.1	Barley	cytosol	11.93	28.89
KRH68922	Soybean	nucleus	24.16	28.73
KRH06456	Soybean	nucleus	25.54	27.02
KRH47899	Soybean	nucleus	25.54	26.68
KRG97199	Soybean	nucleus	24.31	25.69
KRH28296	Soybean	nucleus	13.3	24.93
KRH42021	Soybean	nucleus	7.19	24.1
KRH77192	Soybean	nucleus	12.39	23.75
KRH58186	Soybean	nucleus	12.69	22.99
KRH28295	Soybean	nucleus	10.7	22.36
KRH44510	Soybean	nucleus	9.33	22.18
KRH09683	Soybean	nucleus	8.87	22.14
KRH04348	Soybean	nucleus	12.54	21.98
KRH23623	Soybean	nucleus	7.19	21.56
KRH77195	Soybean	nucleus	11.93	21.2
KRH47401	Soybean	nucleus	6.57	21.18
KRH04346	Soybean	nucleus	11.93	21.02
KRH10664	Soybean	nucleus	11.77	20.87
KRH21680	Soybean	nucleus, vacuole	11.93	20.74
KRH67189	Soybean	cytosol, mitochondrion, nucleus, plastid	18.04	20.63
KRH47400	Soybean	nucleus	8.41	20.45
KRH44509	Soybean	nucleus	6.57	20.19
KRH58189	Soybean	nucleus	11.77	20.16
KRH04347	Soybean	nucleus	10.4	19.94
KRH58187	Soybean	endoplasmic reticulum	10.24	19.94
KRH49880	Soybean	nucleus	9.94	19.76
KRG95511	Soybean	cytosol, mitochondrion, nucleus, plastid	17.74	19.73
KRH23624	Soybean	nucleus	8.56	19.72
KRH00980	Soybean	nucleus	6.12	19.7
KRH44511	Soybean	nucleus	9.79	19.51
KRH77193	Soybean	nucleus	9.48	18.9
KRH32008	Soybean	extracellular, plastid	18.81	18.52
KRH47399	Soybean	nucleus	9.63	18.48
KRH71432	Soybean	nucleus	18.35	18.38
KRH48858	Soybean	nucleus	9.02	18.32
KRH40248	Soybean	cytosol	3.98	18.06
KRH23621	Soybean	nucleus	7.95	17.87
KRH66425	Soybean	nucleus	8.41	17.63
KRH00979	Soybean	nucleus	8.1	17.43
KRH41187	Soybean	nucleus	16.67	17.3
KRH09685	Soybean	cytosol	7.8	17.23
KRH59908	Soybean	nucleus	16.36	16.96
KRH00981	Soybean	nucleus	8.41	16.92
KRH47398	Soybean	nucleus	9.48	16.76
KRH40246	Soybean	nucleus, vacuole	6.88	16.67
KRH48860	Soybean	nucleus	7.95	16.46
KRH44512	Soybean	nucleus	9.33	16.27
KRH66407	Soybean	nucleus	9.63	16.15
KRH48847	Soybean	nucleus	9.02	15.49
KRH48144	Soybean	nucleus	15.14	15.23
KRH65046	Soybean	nucleus	14.98	15.15

Protein Annotations

EntrezGene:100785708	MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A0R0IT59	EMBL:ACUP02005226	ncoils:Coil
EnsemblPlantsGene:GLYMA_08G271900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KRH45440	ProteinID:KRH45440	ProteinID:KRH45440.1	InterPro:MYC/MYB_N
PFAM:PF00010	PFAM:PF14215	PFscan:PS50888	PANTHER:PTHR11514	PANTHER:PTHR11514:SF43	SMART:SM00353
SUPFAM:SSF101447	SUPFAM:SSF47459	UniParc:UPI000189D6B3	InterPro:bHLH_dom	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:+:35595941..35598644

Molecular Weight (calculated)

71567.8 Da

IEP (calculated)

5.365

GRAVY (calculated)

-0.602

Length

654 amino acids

Sequence
(BLAST)

001: MTEYRMNLWT DDNSSVMEAF MSSSDLSSLW LATPQSATST TTPGTAKAPP PPPPPPPPPA QSQSLLNQET LQQRLQTLIE GACESWTYAI FWQSSYDYSS
101: GTSLLGWGDG YYKGEEDKDK VKTKAPKTRS SAEQDHRKKV LRELNSLISG PSASADDIDE EVTDTEWFFL VSMTQSFVNG SGLPGQAFFN SSPVWVAGPE
201: RLSESACERA RQGQLFGLQT LVCIPSANGV VELASAEVIF QNPDLMNKVR DLFNFNNNNN NNNPETCSWA LNCVATTDQG ENDPSSLWLN PEIKDSSTVS
301: PPNSTVNKTM HFETPGSSTL TETPSAAAAV HVPNSKSQGF FPRELNFSNS LKPESGEILS FGESKKSSYN GAFFPGVVAV EENNNNNKNK KKRSPVVSRS
401: SIDDGMLSFT SLPAANIKSV NGACVGAGDS DHSDLEASVA KQVVEPEKRP RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP NVSKMDKASL
501: LGDAILYINE LKSKLNVLDS EKTELEKQLD STKKELELAT KNPPPPPPPP PPPGPPPSNS VEPKKTTSKL ADLELEVKII GWDAMVRIQC SKKNHPAARL
601: MAALKDLDLE VHHASVSVVN DLMIQQATVN MGNKFYTQEQ LLSALSSKVG DELR

Best Arabidopsis Sequence Match ( AT1G32640.1 )
(BLAST)

001: MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT PTPAMEIPAQ AGFNQETLQQ RLQALIEGTH EGWTYAIFWQ PSYDFSGASV
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG

Arabidopsis Description

MYC2ZBF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7C3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.