Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU80776 | Sorghum | nucleus | 62.5 | 66.54 |
| OQU75588 | Sorghum | nucleus | 62.5 | 66.54 |
| OQU80778 | Sorghum | nucleus | 57.86 | 60.0 |
| Os08t0543700-00 | Rice | nucleus, peroxisome, plastid | 49.64 | 52.85 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 51.79 | 51.97 |
| KXG25462 | Sorghum | nucleus | 51.07 | 51.44 |
| OQU86344 | Sorghum | nucleus | 44.29 | 48.44 |
| EER99201 | Sorghum | nucleus | 48.21 | 45.61 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 44.29 | 44.93 |
| Bra017527.1-P | Field mustard | nucleus | 25.0 | 30.97 |
| Bra013263.1-P | Field mustard | nucleus | 24.29 | 25.09 |
| VIT_02s0025g02610.t01 | Wine grape | nucleus | 28.93 | 22.44 |
| Bra024992.1-P | Field mustard | nucleus | 21.43 | 22.14 |
| PGSC0003DMT400014089 | Potato | nucleus | 29.29 | 21.35 |
| PGSC0003DMT400028057 | Potato | nucleus | 29.64 | 21.34 |
| Solyc10g009290.1.1 | Tomato | nucleus | 32.86 | 20.4 |
| Solyc10g009270.2.1 | Tomato | nucleus | 28.57 | 20.36 |
| CDY70013 | Canola | nucleus | 18.21 | 20.24 |
| KRH06400 | Soybean | nucleus | 33.21 | 19.96 |
| PGSC0003DMT400014097 | Potato | nucleus | 32.5 | 19.91 |
| AT4G00870.1 | Thale cress | nucleus, plastid | 29.29 | 19.39 |
| KRH47834 | Soybean | nucleus | 31.79 | 19.18 |
| Solyc01g096370.2.1 | Tomato | nucleus | 30.36 | 18.89 |
| PGSC0003DMT400047220 | Potato | nucleus | 30.36 | 18.81 |
| VIT_15s0048g02820.t01 | Wine grape | nucleus | 33.21 | 18.71 |
| Solyc08g083170.1.1 | Tomato | extracellular | 25.36 | 18.35 |
| PGSC0003DMT400031899 | Potato | plastid | 27.14 | 17.63 |
| Bra017520.1-P | Field mustard | nucleus | 28.21 | 15.86 |
| PGSC0003DMT400015017 | Potato | nucleus | 25.0 | 15.35 |
| Solyc08g008600.2.1 | Tomato | nucleus | 24.64 | 15.27 |
| Bra017523.1-P | Field mustard | nucleus | 27.5 | 15.19 |
| AT5G46830.1 | Thale cress | nucleus | 27.5 | 15.07 |
| EES01345 | Sorghum | nucleus | 25.71 | 14.88 |
| Bra024998.1-P | Field mustard | nucleus | 30.0 | 14.48 |
| AT5G46760.1 | Thale cress | nucleus | 30.36 | 14.36 |
| AT4G17880.1 | Thale cress | nucleus | 30.0 | 14.26 |
| OQU92034 | Sorghum | nucleus | 16.07 | 14.2 |
| Bra010178.1-P | Field mustard | nucleus | 30.36 | 14.17 |
| AT1G32640.1 | Thale cress | nucleus | 31.07 | 13.96 |
| PGSC0003DMT400002963 | Potato | nucleus | 29.64 | 13.88 |
| KRH75613 | Soybean | nucleus | 31.43 | 13.81 |
| KXG39824 | Sorghum | nucleus | 16.07 | 13.8 |
| EES10849 | Sorghum | nucleus | 16.79 | 13.62 |
| KRH45440 | Soybean | nucleus | 31.43 | 13.46 |
| Solyc08g005050.2.1 | Tomato | nucleus | 22.14 | 13.36 |
| KXG37671 | Sorghum | nucleus | 16.79 | 13.2 |
| Bra024993.1-P | Field mustard | nucleus | 17.5 | 13.0 |
| KRH74418 | Soybean | nucleus | 29.64 | 12.93 |
| EER93685 | Sorghum | mitochondrion | 17.14 | 12.9 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 30.36 | 12.82 |
| OQU92032 | Sorghum | nucleus | 15.36 | 12.65 |
| OQU77369 | Sorghum | nucleus | 18.93 | 12.62 |
| Solyc08g076930.1.1 | Tomato | nucleus | 30.71 | 12.48 |
| OQU75589 | Sorghum | nucleus | 17.14 | 12.47 |
| PGSC0003DMT400045204 | Potato | nucleus | 30.71 | 12.39 |
| EER93684 | Sorghum | nucleus | 16.79 | 12.21 |
| KXG37866 | Sorghum | nucleus | 15.71 | 11.86 |
| KXG24110 | Sorghum | nucleus | 16.79 | 11.81 |
| KXG39194 | Sorghum | nucleus | 29.64 | 11.74 |
| KRH39540 | Soybean | nucleus | 29.64 | 11.35 |
| EES19274 | Sorghum | nucleus | 21.07 | 10.05 |
| EER99993 | Sorghum | nucleus | 20.71 | 9.32 |
| OQU82119 | Sorghum | nucleus | 17.14 | 8.79 |
| OQU82120 | Sorghum | nucleus | 17.86 | 8.5 |
| OQU82117 | Sorghum | nucleus | 17.86 | 8.47 |
| OQU88697 | Sorghum | nucleus | 20.0 | 8.27 |
| OQU81560 | Sorghum | nucleus | 16.07 | 7.64 |
| Bra013264.1-P | Field mustard | nucleus | 5.0 | 4.71 |
| CDY70012 | Canola | nucleus | 3.93 | 4.12 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1Z5RAN9 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:OQU80777 |
| ProteinID:OQU80777 | ProteinID:OQU80777.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF68 |
| SMART:SM00353 | EnsemblPlantsGene:SORBI_3007G183100 | SUPFAM:SSF47459 | UniParc:UPI000B8B9883 | InterPro:bHLH_dom | SEG:seg |
Description
hypothetical protein
Coordinates
chr7:+:61633826..61634674
Molecular Weight (calculated)
29530.8 Da
IEP (calculated)
6.865
GRAVY (calculated)
-0.225
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEVVCWPAA SCTSPSSPAA FSTTGQHPEL DFVSSELLER WLGLGSDDCL DDGAGWGDEG SRSAGQDDVD DQSGSGPGQP LAPAPPKRRG RKPGPRSNGP
101: VISHVEAERQ RRDKLNRRFC ELRAAVPTVT RMDKASLLAD AAAYIAELRD RVEQLEAEAK QAATTSVAAA AVTCSATLVA GVTRSPTSFG GFHEKLEVRM
201: VGKGAAALRL TTTTTAASHV HAPARFMLAL RSLDLPHASV CRVGDVTVQD AVVDVPAAAL RSERGLRVAL LHSLQRFAAS
101: VISHVEAERQ RRDKLNRRFC ELRAAVPTVT RMDKASLLAD AAAYIAELRD RVEQLEAEAK QAATTSVAAA AVTCSATLVA GVTRSPTSFG GFHEKLEVRM
201: VGKGAAALRL TTTTTAASHV HAPARFMLAL RSLDLPHASV CRVGDVTVQD AVVDVPAAAL RSERGLRVAL LHSLQRFAAS
001: MYNLTFSPSL SSSLLSFTQQ TPAAIVSSSP PDLVLQQKLR FVVETSPDRW AYVIFWQKMF DDQSDRSYLV WVDGHFCGNK NNNSQENYTT NSIECELMMD
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
Arabidopsis Description
BHLH14Transcription factor bHLH14 [Source:UniProtKB/Swiss-Prot;Acc:O23090]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.