Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g083170.1.1 | Tomato | extracellular | 42.66 | 39.79 |
| VIT_15s0048g02820.t01 | Wine grape | nucleus | 52.91 | 38.43 |
| PGSC0003DMT400031899 | Potato | plastid | 44.88 | 37.59 |
| PGSC0003DMT400015017 | Potato | nucleus | 43.21 | 34.21 |
| Solyc08g008600.2.1 | Tomato | nucleus | 42.66 | 34.07 |
| HORVU5Hr1G080080.1 | Barley | nucleus, plastid | 19.11 | 32.86 |
| TraesCS5B01G307000.1 | Wheat | nucleus | 24.93 | 32.26 |
| TraesCS5D01G313600.1 | Wheat | nucleus | 24.93 | 32.26 |
| TraesCS5A01G306600.1 | Wheat | nucleus | 24.38 | 32.0 |
| TraesCS5D01G313500.1 | Wheat | nucleus | 24.65 | 31.9 |
| TraesCS5A01G306200.1 | Wheat | nucleus | 24.65 | 31.9 |
| Zm00001d031717_P001 | Maize | nucleus | 22.44 | 31.89 |
| TraesCS5B01G307100.1 | Wheat | nucleus | 24.1 | 31.87 |
| HORVU5Hr1G079900.1 | Barley | cytosol | 23.82 | 31.85 |
| TraesCS5A01G306700.1 | Wheat | peroxisome | 24.1 | 31.75 |
| TraesCS5D01G313700.1 | Wheat | nucleus | 24.1 | 31.64 |
| TraesCS2B01G469200.1 | Wheat | nucleus | 21.33 | 31.3 |
| TraesCSU01G222600.1 | Wheat | nucleus | 21.33 | 31.3 |
| TraesCS2A01G448500.1 | Wheat | nucleus | 22.16 | 31.25 |
| TraesCS5B01G306600.1 | Wheat | nucleus | 23.55 | 31.14 |
| TraesCS5B01G306800.1 | Wheat | nucleus | 24.1 | 31.07 |
| TraesCS1D01G374800.1 | Wheat | nucleus | 22.71 | 30.94 |
| Zm00001d052728_P001 | Maize | nucleus | 23.55 | 30.91 |
| TraesCS5D01G313400.1 | Wheat | nucleus | 23.27 | 30.77 |
| TraesCS5A01G306500.1 | Wheat | nucleus | 23.82 | 30.61 |
| HORVU5Hr1G080040.1 | Barley | nucleus | 22.71 | 30.6 |
| KXG25462 | Sorghum | nucleus | 23.55 | 30.58 |
| TraesCS7D01G102200.1 | Wheat | nucleus | 21.61 | 30.47 |
| TraesCS2B01G469300.1 | Wheat | nucleus | 21.61 | 30.47 |
| OQU75588 | Sorghum | nucleus | 22.16 | 30.42 |
| OQU80776 | Sorghum | nucleus | 22.16 | 30.42 |
| Os09t0519100-00 | Rice | nucleus | 22.16 | 30.3 |
| Zm00001d006150_P001 | Maize | nucleus | 24.1 | 29.9 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 22.71 | 29.71 |
| Os08t0543700-00 | Rice | nucleus, peroxisome, plastid | 21.61 | 29.66 |
| HORVU0Hr1G025420.1 | Barley | cytosol, nucleus | 13.3 | 29.27 |
| TraesCS5A01G306400.1 | Wheat | nucleus | 18.01 | 29.15 |
| OQU80777 | Sorghum | nucleus | 22.44 | 28.93 |
| OQU80778 | Sorghum | nucleus | 21.33 | 28.52 |
| TraesCS1B01G387900.1 | Wheat | nucleus | 18.84 | 28.45 |
| EER99201 | Sorghum | nucleus | 23.27 | 28.38 |
| TraesCS1A01G369200.1 | Wheat | nucleus | 15.51 | 28.28 |
| OQU86344 | Sorghum | nucleus | 19.94 | 28.12 |
| Zm00001d021164_P001 | Maize | nucleus | 22.44 | 27.93 |
| VIT_00s0824g00020.t01 | Wine grape | nucleus | 12.47 | 26.32 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 19.39 | 25.09 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 42.38 | 23.08 |
| VIT_07s0205g00160.t01 | Wine grape | nucleus | 11.63 | 22.58 |
| VIT_07s0141g01060.t01 | Wine grape | nucleus | 29.64 | 21.79 |
| HORVU1Hr1G050560.1 | Barley | nucleus | 40.44 | 21.34 |
| Zm00001d030028_P001 | Maize | nucleus | 41.55 | 21.28 |
| KXG39194 | Sorghum | nucleus | 41.55 | 21.22 |
| Zm00001d047017_P001 | Maize | nucleus | 41.0 | 21.05 |
| Os10t0575000-01 | Rice | nucleus | 40.72 | 21.03 |
| TraesCS1B01G208000.1 | Wheat | nucleus | 39.89 | 20.78 |
| TraesCS1A01G193200.1 | Wheat | nucleus | 39.89 | 20.78 |
| TraesCS1D01G196900.1 | Wheat | nucleus | 39.89 | 20.72 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 12.47 | 19.74 |
| VIT_15s0046g00320.t01 | Wine grape | nucleus | 30.19 | 18.05 |
| VIT_00s1314g00010.t01 | Wine grape | nucleus | 16.07 | 17.37 |
| VIT_03s0088g01240.t01 | Wine grape | nucleus | 16.07 | 16.86 |
| VIT_07s0205g00180.t01 | Wine grape | nucleus | 16.34 | 16.86 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 9.14 | 16.75 |
| VIT_07s0205g00190.t01 | Wine grape | nucleus | 15.24 | 16.27 |
| VIT_02s0025g03450.t01 | Wine grape | nucleus | 25.76 | 14.81 |
| VIT_07s0205g00170.t01 | Wine grape | cytosol | 4.71 | 13.49 |
| VIT_07s0104g00090.t01 | Wine grape | nucleus | 25.76 | 13.36 |
| VIT_15s0046g02560.t01 | Wine grape | nucleus | 21.61 | 11.84 |
Protein Annotations
| EntrezGene:100246135 | wikigene:100246135 | MapMan:15.5.32 | Gene3D:4.10.280.10 | ProteinID:CCB58298 | ProteinID:CCB58298.1 |
| ncoils:Coil | UniProt:F6HU75 | EMBL:FN596251 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EntrezGene:LOC100246135 | wikigene:LOC100246135 |
| InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF99 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002109BA5 | ArrayExpress:VIT_02s0025g02610 | EnsemblPlantsGene:VIT_02s0025g02610 | EnsemblPlants:VIT_02s0025g02610.t01 |
| RefSeq:XP_002279973 | RefSeq:XP_002279973.1 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2:+:2285836..2287385
Molecular Weight (calculated)
40276.1 Da
IEP (calculated)
6.719
GRAVY (calculated)
-0.372
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGDVATWEW YYMVSVTKSF VVGDGVLGRV FSSGAFVWLT DRELQCYDCE RVTEARMNGI RTLLCVSTSC GVLELGSLDM IKEDWGLVLL AKSLFGSKPS
101: TQVSQIQIPD RNLSIFDIGA ASGVQRESHE GKQQKDHDKK DAGTTVGRSS SDSGHSDSDE PFASALTENI RPKKRGRKPA TGREMPLNHV EAERQRREKL
201: NHRFYALRAV VPNVSRMDKA SLLADAVSYI HELKTKIDDL ETKLREEVRK PKACLAEMYD NQSTTTTSIV DHGRSSSSYG AIRMEVDVKI IGSEAMIRVQ
301: CPDLNYPSAI LMDALRDLDL RVLHASVSSV KELMLQDVVV RIPEGLTSEE SMRTAILKRM Q
101: TQVSQIQIPD RNLSIFDIGA ASGVQRESHE GKQQKDHDKK DAGTTVGRSS SDSGHSDSDE PFASALTENI RPKKRGRKPA TGREMPLNHV EAERQRREKL
201: NHRFYALRAV VPNVSRMDKA SLLADAVSYI HELKTKIDDL ETKLREEVRK PKACLAEMYD NQSTTTTSIV DHGRSSSSYG AIRMEVDVKI IGSEAMIRVQ
301: CPDLNYPSAI LMDALRDLDL RVLHASVSSV KELMLQDVVV RIPEGLTSEE SMRTAILKRM Q
001: MYNLTFSPSL SSSLLSFTQQ TPAAIVSSSP PDLVLQQKLR FVVETSPDRW AYVIFWQKMF DDQSDRSYLV WVDGHFCGNK NNNSQENYTT NSIECELMMD
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
Arabidopsis Description
BHLH14Transcription factor bHLH14 [Source:UniProtKB/Swiss-Prot;Acc:O23090]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.