Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400031899 | Potato | plastid | 86.82 | 77.96 |
| Solyc08g008600.2.1 | Tomato | nucleus | 60.47 | 51.77 |
| VIT_02s0025g02610.t01 | Wine grape | nucleus | 39.79 | 42.66 |
| Solyc10g009270.2.1 | Tomato | nucleus | 40.57 | 39.95 |
| Solyc10g009290.1.1 | Tomato | nucleus | 43.41 | 37.25 |
| Solyc01g096370.2.1 | Tomato | nucleus | 41.6 | 35.78 |
| TraesCSU01G222600.1 | Wheat | nucleus | 20.67 | 32.52 |
| TraesCS2B01G469200.1 | Wheat | nucleus | 20.67 | 32.52 |
| TraesCS2B01G469300.1 | Wheat | nucleus | 20.93 | 31.64 |
| TraesCS2A01G448500.1 | Wheat | nucleus | 20.67 | 31.25 |
| TraesCS5B01G307000.1 | Wheat | nucleus | 22.48 | 31.18 |
| TraesCS1D01G374800.1 | Wheat | nucleus | 21.19 | 30.94 |
| TraesCS5D01G313600.1 | Wheat | nucleus | 22.22 | 30.82 |
| TraesCS1A01G369200.1 | Wheat | nucleus | 15.76 | 30.81 |
| HORVU0Hr1G025420.1 | Barley | cytosol, nucleus | 12.92 | 30.49 |
| TraesCS5A01G306200.1 | Wheat | nucleus | 21.96 | 30.47 |
| TraesCS5D01G313500.1 | Wheat | nucleus | 21.96 | 30.47 |
| TraesCS5B01G306800.1 | Wheat | nucleus | 21.96 | 30.36 |
| HORVU5Hr1G080040.1 | Barley | nucleus | 20.93 | 30.22 |
| TraesCS5B01G307100.1 | Wheat | nucleus | 20.93 | 29.67 |
| TraesCS7D01G102200.1 | Wheat | nucleus | 19.38 | 29.3 |
| TraesCS1B01G387900.1 | Wheat | nucleus | 18.09 | 29.29 |
| TraesCS5A01G306500.1 | Wheat | nucleus | 21.19 | 29.18 |
| TraesCS5A01G306600.1 | Wheat | nucleus | 20.67 | 29.09 |
| TraesCS5D01G313400.1 | Wheat | nucleus | 20.41 | 28.94 |
| TraesCS5B01G306600.1 | Wheat | nucleus | 20.41 | 28.94 |
| Os09t0519100-00 | Rice | nucleus | 19.64 | 28.79 |
| Zm00001d031717_P001 | Maize | nucleus | 18.86 | 28.74 |
| TraesCS5D01G313700.1 | Wheat | nucleus | 20.16 | 28.36 |
| TraesCS5A01G306700.1 | Wheat | peroxisome | 19.9 | 28.1 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 19.9 | 27.9 |
| Zm00001d006150_P001 | Maize | nucleus | 20.93 | 27.84 |
| Os08t0543700-00 | Rice | nucleus, peroxisome, plastid | 18.86 | 27.76 |
| OQU80776 | Sorghum | nucleus | 18.86 | 27.76 |
| OQU75588 | Sorghum | nucleus | 18.86 | 27.76 |
| Zm00001d052728_P001 | Maize | nucleus | 19.64 | 27.64 |
| HORVU5Hr1G080080.1 | Barley | nucleus, plastid | 14.99 | 27.62 |
| EER99201 | Sorghum | nucleus | 20.93 | 27.36 |
| KXG25462 | Sorghum | nucleus | 19.38 | 26.98 |
| Zm00001d021164_P001 | Maize | nucleus | 20.16 | 26.9 |
| HORVU5Hr1G079900.1 | Barley | cytosol | 18.6 | 26.67 |
| OQU80778 | Sorghum | nucleus | 18.35 | 26.3 |
| TraesCS5A01G306400.1 | Wheat | nucleus | 14.73 | 25.56 |
| OQU80777 | Sorghum | nucleus | 18.35 | 25.36 |
| OQU86344 | Sorghum | nucleus | 16.54 | 25.0 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 17.83 | 24.73 |
| Solyc06g083980.1.1 | Tomato | nucleus | 28.17 | 22.85 |
| Solyc08g005050.2.1 | Tomato | nucleus | 24.81 | 20.69 |
| HORVU1Hr1G050560.1 | Barley | nucleus | 35.66 | 20.18 |
| Zm00001d030028_P001 | Maize | nucleus | 36.43 | 20.0 |
| TraesCS1B01G208000.1 | Wheat | nucleus | 35.4 | 19.77 |
| Os10t0575000-01 | Rice | nucleus | 35.66 | 19.74 |
| Solyc08g076930.1.1 | Tomato | nucleus | 35.14 | 19.74 |
| TraesCS1D01G196900.1 | Wheat | nucleus | 35.4 | 19.71 |
| Zm00001d047017_P001 | Maize | nucleus | 35.66 | 19.63 |
| KXG39194 | Sorghum | nucleus | 35.4 | 19.38 |
| TraesCS1A01G193200.1 | Wheat | nucleus | 34.63 | 19.34 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 11.63 | 19.23 |
| Solyc01g096050.2.1 | Tomato | nucleus | 29.46 | 18.84 |
| Solyc01g106460.2.1 | Tomato | nucleus | 11.63 | 18.52 |
| Solyc05g050560.1.1 | Tomato | nucleus | 27.39 | 18.31 |
| Solyc06g064590.1.1 | Tomato | nucleus | 12.66 | 17.44 |
| Solyc06g064580.1.1 | Tomato | nucleus | 13.18 | 16.78 |
| Solyc02g091810.1.1 | Tomato | nucleus | 12.92 | 15.72 |
| Solyc02g091800.2.1 | Tomato | nucleus | 13.95 | 15.56 |
| Solyc09g065100.1.1 | Tomato | nucleus | 26.36 | 15.0 |
| Solyc02g091820.1.1 | Tomato | nucleus | 11.89 | 14.11 |
| Solyc08g081140.2.1 | Tomato | nucleus | 21.19 | 13.1 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | UniProt:K4CPW2 | InterPro:MYC/MYB_N |
| PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF99 | SMART:SM00353 |
| SUPFAM:SSF47459 | EnsemblPlantsGene:Solyc08g083170.1 | EnsemblPlants:Solyc08g083170.1.1 | UniParc:UPI000276CAE6 | InterPro:bHLH_dom | SEG:seg |
Description
No Description!
Coordinates
chr8:+:65712232..65713395
Molecular Weight (calculated)
43822.4 Da
IEP (calculated)
8.041
GRAVY (calculated)
-0.283
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDFISTSSS FSSTSLLQKR LHYIIHNRQE WWVYGIFWQA SKDANGRLIF SWGDGHFRDL ALAKVHNANV SDMEMFYAVS APNCFLSEDD LIVHAYNSGS
101: YVWLNNYYEL QIYNYDRAKE AHLHGIRTLL CISTPHGVVE LGSSQVIQEN LELVQLIKSL FGQINDHGFN FVPLGDPMDT KTITMGSDSG NSDESSAMNK
201: DSPKKRARKS TTAKNHVEAE RQRREKLNHR FYALRSVVPN VSKMDKASLL ADAVTYINEL KAKVEELKAK IEVSTKKLIQ KRNCVSSSAV VDGTNININI
301: NSSFVDGMEV EVKIIGVEAM IRVRSPNVNY PCARLMNVLR ELEFQIHHAT VSSMKEMMQQ DVVIRVPHNV TNEEAIKSVI LTKLSFA
101: YVWLNNYYEL QIYNYDRAKE AHLHGIRTLL CISTPHGVVE LGSSQVIQEN LELVQLIKSL FGQINDHGFN FVPLGDPMDT KTITMGSDSG NSDESSAMNK
201: DSPKKRARKS TTAKNHVEAE RQRREKLNHR FYALRSVVPN VSKMDKASLL ADAVTYINEL KAKVEELKAK IEVSTKKLIQ KRNCVSSSAV VDGTNININI
301: NSSFVDGMEV EVKIIGVEAM IRVRSPNVNY PCARLMNVLR ELEFQIHHAT VSSMKEMMQQ DVVIRVPHNV TNEEAIKSVI LTKLSFA
001: MYNLTFSPSL SSSLLSFTQQ TPAAIVSSSP PDLVLQQKLR FVVETSPDRW AYVIFWQKMF DDQSDRSYLV WVDGHFCGNK NNNSQENYTT NSIECELMMD
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
Arabidopsis Description
BHLH14Transcription factor bHLH14 [Source:UniProtKB/Swiss-Prot;Acc:O23090]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.